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MS016151 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016151
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold9_2:720603..721126
RNA-Seq ExpressionMS016151
SyntenyMS016151
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152671.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Momordica charantia]5.4e-5891.45Show/hide
Query:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN
        MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG          GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN
Subjt:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN

Query:  YEPEGWKCKCGPSFYSP
        YEPEGWKCKCGPSFYSP
Subjt:  YEPEGWKCKCGPSFYSP

XP_022955437.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]7.3e-3966.4Show/hide
Query:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS
        MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ  F F++V              RGMR+IGSSPPSC+HKCYGC+PCEAIQVPT +R S
Subjt:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS

Query:  HLGVQYTNYEPEGWKCKCGPSFYSP
        H+G+QYTNYEPEGWKCKCGPSFYSP
Subjt:  HLGVQYTNYEPEGWKCKCGPSFYSP

XP_022980756.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]3.3e-3967.2Show/hide
Query:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS
        MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ  F F++V              RGMR+IGSSPPSC+HKCYGCSPCEAIQVPT +R S
Subjt:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS

Query:  HLGVQYTNYEPEGWKCKCGPSFYSP
        H+G+QYTNYEPEGWKCKCGPSFYSP
Subjt:  HLGVQYTNYEPEGWKCKCGPSFYSP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]4.7e-3865.6Show/hide
Query:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS
        MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ  F  ++V              RGMR+IGSSPPSC+HKCYGC+PCEAIQVPT +R S
Subjt:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS

Query:  HLGVQYTNYEPEGWKCKCGPSFYSP
        H+G+QYTNYEPEGWKCKCGPSFYSP
Subjt:  HLGVQYTNYEPEGWKCKCGPSFYSP

XP_038904354.1 EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida]5.6e-3969.35Show/hide
Query:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPT-TSRHSH
        MK T+ CFIL LQ+A  CWVSAA R FAPNHA  LLPHKQ                   EA  RGMR+IGSSPPSC+HKCYGC PCEAIQVPT T+RHSH
Subjt:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPT-TSRHSH

Query:  LGVQYTNYEPEGWKCKCGPSFYSP
        +GVQYTNYEPEGWKCKCGPSFYSP
Subjt:  LGVQYTNYEPEGWKCKCGPSFYSP

TrEMBL top hitse value%identityAlignment
A0A1S3BIS6 Epidermal patterning factor-like protein5.1e-3869.75Show/hide
Query:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG---------PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVP-TTSRHSHLGVQY
        MKGT+ CFI  LQ+   CWVSAA R FAPN A  LLPHKQG             E   RGMR+IGSSPPSC+HKCYGC PCEAIQVP TT+R SH+GVQY
Subjt:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG---------PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVP-TTSRHSHLGVQY

Query:  TNYEPEGWKCKCGPSFYSP
        TNYEPEGWKCKCGPSFYSP
Subjt:  TNYEPEGWKCKCGPSFYSP

A0A5D3BVF6 Epidermal patterning factor-like protein5.1e-3869.75Show/hide
Query:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG---------PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVP-TTSRHSHLGVQY
        MKGT+ CFI  LQ+   CWVSAA R FAPN A  LLPHKQG             E   RGMR+IGSSPPSC+HKCYGC PCEAIQVP TT+R SH+GVQY
Subjt:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG---------PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVP-TTSRHSHLGVQY

Query:  TNYEPEGWKCKCGPSFYSP
        TNYEPEGWKCKCGPSFYSP
Subjt:  TNYEPEGWKCKCGPSFYSP

A0A6J1DIF6 Epidermal patterning factor-like protein2.6e-5891.45Show/hide
Query:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN
        MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQG          GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN
Subjt:  MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPF--------GFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTN

Query:  YEPEGWKCKCGPSFYSP
        YEPEGWKCKCGPSFYSP
Subjt:  YEPEGWKCKCGPSFYSP

A0A6J1GTM4 Epidermal patterning factor-like protein3.5e-3966.4Show/hide
Query:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS
        MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ  F F++V              RGMR+IGSSPPSC+HKCYGC+PCEAIQVPT +R S
Subjt:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS

Query:  HLGVQYTNYEPEGWKCKCGPSFYSP
        H+G+QYTNYEPEGWKCKCGPSFYSP
Subjt:  HLGVQYTNYEPEGWKCKCGPSFYSP

A0A6J1IUG9 Epidermal patterning factor-like protein1.6e-3967.2Show/hide
Query:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS
        MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ  F F++V              RGMR+IGSSPPSC+HKCYGCSPCEAIQVPT +R S
Subjt:  MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVN-------------RGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHS

Query:  HLGVQYTNYEPEGWKCKCGPSFYSP
        H+G+QYTNYEPEGWKCKCGPSFYSP
Subjt:  HLGVQYTNYEPEGWKCKCGPSFYSP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 36.3e-1759.32Show/hide
Query:  EAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGP
        E + +  R IGS PPSC+ KCYGC PCEAIQ PT S   HL   Y NY+PEGW+C C P
Subjt:  EAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.8e-0842.86Show/hide
Query:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP
        + R +R +GSSPP C  KC  C+PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.3e-0839.71Show/hide
Query:  PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP
        P GF   N+     GSSPP+C+ KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 14.3e-1032.03Show/hide
Query:  KGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLG--------------
        K T     L L +  +  VS+  +P  P    P+ P         A+      +GS+PPSC ++C  C PC AIQVPT    S                 
Subjt:  KGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLG--------------

Query:  ------VQYTNYEPEGWKCKCGPSFYSP
               QY+NY+P GWKC C   FY+P
Subjt:  ------VQYTNYEPEGWKCKCGPSFYSP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 55.0e-0640.74Show/hide
Query:  GSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP
        GS PP C+ KC  C PC+A+ VP         +    Y PE W+CKCG   + P
Subjt:  GSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.3e-0942.86Show/hide
Query:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP
        + R +R +GSSPP C  KC  C+PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP

AT2G30370.2 allergen-related1.3e-0942.86Show/hide
Query:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP
        + R +R +GSSPP C  KC  C+PC+ + VP        G   T  Y PE W+CKCG   Y P
Subjt:  VNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYT-NYEPEGWKCKCGPSFYSP

AT3G13898.1 unknown protein4.5e-1859.32Show/hide
Query:  EAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGP
        E + +  R IGS PPSC+ KCYGC PCEAIQ PT S   HL   Y NY+PEGW+C C P
Subjt:  EAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)3.8e-0939.71Show/hide
Query:  PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP
        P GF   N+     GSSPP+C+ KC  C PC+ + VP     S        Y PE W+CKCG   + P
Subjt:  PFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP

AT5G10310.1 unknown protein3.1e-1132.03Show/hide
Query:  KGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLG--------------
        K T     L L +  +  VS+  +P  P    P+ P         A+      +GS+PPSC ++C  C PC AIQVPT    S                 
Subjt:  KGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLG--------------

Query:  ------VQYTNYEPEGWKCKCGPSFYSP
               QY+NY+P GWKC C   FY+P
Subjt:  ------VQYTNYEPEGWKCKCGPSFYSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAACATTCTGTTGTTTTATATTGACTCTGCAAATAGCTTGTTCTTGTTGGGTTTCTGCTGCAACCAGACCTTTTGCTCCAAATCATGCTCTTCCTCTCCTTCC
CCACAAACAAGGTCCGTTTGGGTTTGAAGCTGTGAATAGAGGAATGAGGGAAATAGGGTCAAGTCCGCCGAGCTGTCAGCACAAGTGCTATGGATGCAGTCCATGTGAAG
CAATTCAGGTGCCTACCACCAGCAGGCACAGCCATTTGGGGGTCCAATACACTAACTATGAGCCCGAGGGTTGGAAATGCAAGTGTGGCCCTTCGTTTTACAGCCCT
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAACATTCTGTTGTTTTATATTGACTCTGCAAATAGCTTGTTCTTGTTGGGTTTCTGCTGCAACCAGACCTTTTGCTCCAAATCATGCTCTTCCTCTCCTTCC
CCACAAACAAGGTCCGTTTGGGTTTGAAGCTGTGAATAGAGGAATGAGGGAAATAGGGTCAAGTCCGCCGAGCTGTCAGCACAAGTGCTATGGATGCAGTCCATGTGAAG
CAATTCAGGTGCCTACCACCAGCAGGCACAGCCATTTGGGGGTCCAATACACTAACTATGAGCCCGAGGGTTGGAAATGCAAGTGTGGCCCTTCGTTTTACAGCCCT
Protein sequenceShow/hide protein sequence
MKGTFCCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGPFGFEAVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKCGPSFYSP