CuGenDBv2

Gene ID	MS016161
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	nucleolin 1
Genome location	scaffold9_2:788514..789621
RNA-Seq Expression	MS016161
Synteny	MS016161
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR008984 - SMAD/FHA domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036698.1 nucleolin 1 [Cucumis melo var. makuwa]

5.7e-126

79.87

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKL++ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR
        P WF+LNKI E EEGK +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K S DDDEDY R+K+RGVR
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRSKD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  DED
        D++
Subjt:  DED

XP_008447630.1 PREDICTED: nucleolin 1 [Cucumis melo]

4.4e-126

80.2

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR
        P WF+LNKI E EEGK +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K S DDDEDY R+K+RGVR
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRSKD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  DED
        D++
Subjt:  DED

XP_022152655.1 protein bfr2 [Momordica charantia]

9.0e-164

100

Show/hide

Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
        PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED
        KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED
Subjt:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED

XP_022980683.1 protein BFR2 [Cucurbita maxima]

4.8e-125

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFA KDRTVSR H+LI+AKTSEN +G P+EP +SFEVIG+NPIWVRSGKNGEIRTFR SEKGE+ PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
        P WF+LNKIAE EEG++I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK SDD+EDYGR+++  VRG
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDDED
        KRKKGAN+DDEDWTDENEDAVEMI K KK QRPKYSTRSKD NKT+KDQ KAA SNKDY EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD ++D
Subjt:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDDED

XP_038898830.1 protein PIF [Benincasa hispida]

6.7e-127

80.78

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRTVSRRH+LIEAKTSEN +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKGE+A GESFCVG QE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
        P WF+LNKIAE EE K+             +RSSDS DIDVSGIDPVKEFGFL MGHEFECYGNRVIRD KKWDWFLDEPRK SDDDEDYGR+K+RGV+G
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDED-----EEEEF
        KRKKGANSDDEDWTDENEDAVEMI K KK +RPKYSTRSKD +KT  DQ KAA SNKDYD   EEDEDDETLGGFIVDDE DN EQMDED     EEEEF
Subjt:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDED-----EEEEF

Query:  SDDDDED
        SDDD+ED
Subjt:  SDDDDED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BHB4 nucleolin 1

2.1e-126

80.2

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR
        P WF+LNKI E EEGK +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K S DDDEDY R+K+RGVR
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRSKD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  DED
        D++
Subjt:  DED

A0A5A7T1L8 Nucleolin 1

2.8e-126

79.87

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKL++ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR
        P WF+LNKI E EEGK +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K S DDDEDY R+K+RGVR
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRSKD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  DED
        D++
Subjt:  DED

A0A5D3BXV5 Nucleolin 1

2.1e-126

80.2

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFASKDRT+SRRH+LIEAKTS+N +GAP+EP +SFEVIGRNPIWVRS KNGEIRTFRRSEKG++APGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR
        P WF+LNKI E EEGK +            +RSSDS+DIDVSGIDPVKEFGFLVMGHEFECYGNRVIRD KKWDWFLD P K S DDDEDY R+K+RGVR
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGS-DDDEDYGRRKRRGVR

Query:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD
        GKRKKGANSDDEDWTDENEDAV+MI K +K QRPKYSTRSKD NK + DQ KAA SNKDYD   EEDEDDETLGGFIVDDEVDN EQMDEDEEEEF DD+
Subjt:  GKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYD---EEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDD

Query:  DED
        D++
Subjt:  DED

A0A6J1DEJ6 protein bfr2

4.4e-164

100

Show/hide

Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
        PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED
        KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED
Subjt:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED

A0A6J1J012 protein BFR2

2.3e-125

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Query:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE
        MEIAGEDGSKLV+ EPVTIFGRGSGFA KDRTVSR H+LI+AKTSEN +G P+EP +SFEVIG+NPIWVRSGKNGEIRTFR SEKGE+ PGESFC+GGQE
Subjt:  MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQE

Query:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG
        P WF+LNKIAE EEG++I            +RSSDS+DIDVSGIDPVKEFGFL  GHEFECYGNRVIRDAKKWDWFLDE RK SDD+EDYGR+++  VRG
Subjt:  PTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRG

Query:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDDED
        KRKKGAN+DDEDWTDENEDAVEMI K KK QRPKYSTRSKD NKT+KDQ KAA SNKDY EEDEDDETLGGFIVDDEVDNEE MDEDE EEEFSDD ++D
Subjt:  KRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDE-EEEFSDDDDED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13780.1 SMAD/FHA domain-containing protein

1.1e-55

43.13

Show/hide

Query:  MEIAGEDGSKLVVGEPV-TIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNG-EIRTFRRSEKGEIAPGESFCVGG
        MEI GEDG+KL +   V  +FGRG+GF ++D TVSRRH+ +  K +    G      +SFEV+GRNP+W+R+ + G +I+T R+ E GEIA G+ FCV G
Subjt:  MEIAGEDGSKLVVGEPV-TIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNG-EIRTFRRSEKGEIAPGESFCVGG

Query:  QEPTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKG-SDDDEDYGRRKRRG
          P WF L +  E+ E                 R+ D  +I+++ IDPVKEFGFLV+G EF+ Y    +RD K+W+WFL++   G SD DED  ++ R+G
Subjt:  QEPTWFKLNKIAEIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKG-SDDDEDYGRRKRRG

Query:  VRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNK----------DYDEEDEDDETLGGFIV-DDEVDNEEQMDE
        +  KR++   ++D+DW+ E+++  E++ K+K+V  P YSTRSK   KT KD N +++S+           D +EED+DDETLGGFIV D+E   EE+ +E
Subjt:  VRGKRKKGANSDDEDWTDENEDAVEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNK----------DYDEEDEDDETLGGFIV-DDEVDNEEQMDE

Query:  DEEEEFSDDDDED
        ++E +  D++DED
Subjt:  DEEEEFSDDDDED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATAGCCGGCGAAGACGGTTCAAAGTTAGTTGTAGGTGAGCCAGTGACGATATTCGGGAGAGGCTCAGGATTTGCTTCCAAAGATCGGACAGTATCTCGTCGTCA
CCTTTTAATCGAAGCTAAAACCTCAGAGAACTGTGATGGAGCTCCCGTGGAGCCTTGGATTTCCTTCGAGGTTATTGGGAGAAACCCTATTTGGGTTCGGAGCGGCAAAA
ATGGCGAAATCAGAACATTTAGAAGGTCGGAAAAGGGCGAGATTGCGCCTGGTGAATCGTTCTGCGTGGGCGGGCAGGAACCGACTTGGTTCAAATTAAACAAAATCGCT
GAAATCGAAGAAGGGAAGCGAATTGTTCCGAAGACCGAGGATCAATTTGCTGAGAGGTTGACGCGTTCTTCTGATTCGGAGGATATCGATGTTTCTGGCATTGATCCTGT
CAAAGAATTTGGTTTTCTTGTTATGGGGCACGAGTTTGAATGCTATGGCAATCGAGTGATTCGTGATGCAAAAAAGTGGGACTGGTTTCTGGATGAGCCGAGAAAAGGAA
GCGATGATGATGAAGATTATGGGAGGAGAAAGAGGAGAGGAGTAAGGGGAAAGAGAAAAAAAGGAGCAAACAGTGACGATGAAGATTGGACAGATGAGAATGAAGATGCT
GTGGAAATGATTGCAAAAGCAAAAAAGGTTCAAAGACCCAAATATTCCACGAGATCAAAGGATCACAATAAAACTAACAAGGATCAAAATAAAGCTGCTAATTCTAACAA
AGACTATGATGAAGAAGATGAAGATGATGAAACTTTAGGAGGTTTTATTGTAGATGATGAAGTAGACAACGAAGAACAGATGGACGAAGATGAAGAAGAAGAATTTTCGG
ACGACGATGATGAGGAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEIAGEDGSKLVVGEPVTIFGRGSGFASKDRTVSRRHLLIEAKTSENCDGAPVEPWISFEVIGRNPIWVRSGKNGEIRTFRRSEKGEIAPGESFCVGGQEPTWFKLNKIA
EIEEGKRIVPKTEDQFAERLTRSSDSEDIDVSGIDPVKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEPRKGSDDDEDYGRRKRRGVRGKRKKGANSDDEDWTDENEDA
VEMIAKAKKVQRPKYSTRSKDHNKTNKDQNKAANSNKDYDEEDEDDETLGGFIVDDEVDNEEQMDEDEEEEFSDDDDED

MS016161 (gene) of Bitter gourd (TR) v1 genome