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MS016164 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016164
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin responsive SAUR protein
Genome locationscaffold9_2:821923..822279
RNA-Seq ExpressionMS016164
SyntenyMS016164
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011651720.1 auxin-responsive protein SAUR78 [Cucumis sativus]2.7e-3972.09Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCE
        MAKLGKLTKLKSAIKRWPSISKL+R+   ++S++VS+A           HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  S++    QGLV+SCE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCE

Query:  VVLFEHLLWMLENAATQLGSADELVEFYT
        VVLFEHLLWMLENAATQLGSADELV+FYT
Subjt:  VVLFEHLLWMLENAATQLGSADELVEFYT

XP_016902534.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]4.7e-3973.08Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC
        MAKLGKLTKLKSAIKRWPSISKL+R+  +S+S+S  S+A           HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  S   E+ QGLVVSC
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC

Query:  EVVLFEHLLWMLENAATQLGSADELVEFYT
        EVVLFEHLLWMLENA TQLGSADELV+FYT
Subjt:  EVVLFEHLLWMLENAATQLGSADELVEFYT

XP_022152670.1 uncharacterized protein LOC111020334 [Momordica charantia]1.9e-56100Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM

Query:  LENAATQLGSADELVEFYT
        LENAATQLGSADELVEFYT
Subjt:  LENAATQLGSADELVEFYT

XP_022955880.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]8.8e-3874.38Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASA--SASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL
        MAKLGKLTKLKSAIKRWPSISKL+R+  +SA  SA++    +LHPV VGRSRRRYL+ SDVV HPLF+E+VDKSS  SD+    +G+VVSCEVVLFEHLL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASA--SASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL

Query:  WMLENAATQLGSADELVEFYT
        WMLENA TQLGSADELV+FYT
Subjt:  WMLENAATQLGSADELVEFYT

XP_038901184.1 auxin-responsive protein SAUR78-like [Benincasa hispida]3.8e-4175.78Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEV
        MAKLG+LTKLKSAIKRWPSISKL+R+   ++S++VSSAA         HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  SDD    QGLVVSCEV
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEV

Query:  VLFEHLLWMLENAATQLGSADELVEFYT
        VLFEHLLWMLENAATQLGSADELV+FYT
Subjt:  VLFEHLLWMLENAATQLGSADELVEFYT

TrEMBL top hitse value%identityAlignment
A0A0A0LBZ7 Uncharacterized protein1.3e-3972.09Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCE
        MAKLGKLTKLKSAIKRWPSISKL+R+   ++S++VS+A           HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  S++    QGLV+SCE
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCE

Query:  VVLFEHLLWMLENAATQLGSADELVEFYT
        VVLFEHLLWMLENAATQLGSADELV+FYT
Subjt:  VVLFEHLLWMLENAATQLGSADELVEFYT

A0A1S4E2S4 auxin-responsive protein SAUR71-like2.3e-3973.08Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC
        MAKLGKLTKLKSAIKRWPSISKL+R+  +S+S+S  S+A           HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  S   E+ QGLVVSC
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC

Query:  EVVLFEHLLWMLENAATQLGSADELVEFYT
        EVVLFEHLLWMLENA TQLGSADELV+FYT
Subjt:  EVVLFEHLLWMLENAATQLGSADELVEFYT

A0A5D3D6I8 Auxin-responsive protein SAUR71-like2.3e-3973.08Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC
        MAKLGKLTKLKSAIKRWPSISKL+R+  +S+S+S  S+A           HLHPV VGRSRRRYL+ SDVV HPLF+ELVDKSS  S   E+ QGLVVSC
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA-----------HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSC

Query:  EVVLFEHLLWMLENAATQLGSADELVEFYT
        EVVLFEHLLWMLENA TQLGSADELV+FYT
Subjt:  EVVLFEHLLWMLENAATQLGSADELVEFYT

A0A6J1DEL2 uncharacterized protein LOC1110203349.2e-57100Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM
        MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM

Query:  LENAATQLGSADELVEFYT
        LENAATQLGSADELVEFYT
Subjt:  LENAATQLGSADELVEFYT

A0A6J1GWA8 auxin-responsive protein SAUR50-like4.3e-3874.38Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASA--SASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL
        MAKLGKLTKLKSAIKRWPSISKL+R+  +SA  SA++    +LHPV VGRSRRRYL+ SDVV HPLF+E+VDKSS  SD+    +G+VVSCEVVLFEHLL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASA--SASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL

Query:  WMLENAATQLGSADELVEFYT
        WMLENA TQLGSADELV+FYT
Subjt:  WMLENAATQLGSADELVEFYT

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR764.0e-1750Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHP------VLVGRSRRRYLVGSDVVDHPLFREL--VDKSSGESDDMEQGQGLVVSCEV
        MAK G KL KLKS +K+  S +      PA  + S SSA    P      V VGR+RR Y V SDVV HPLF++L  VD   G  D       + VSCEV
Subjt:  MAKLG-KLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHP------VLVGRSRRRYLVGSDVVDHPLFREL--VDKSSGESDDMEQGQGLVVSCEV

Query:  VLFEHLLWMLENA---ATQLGSADELVEFY
        VLFEHLLWMLENA    ++  S  ELVEFY
Subjt:  VLFEHLLWMLENA---ATQLGSADELVEFY

Q9C9E1 Auxin-responsive protein SAUR789.5e-2754.55Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASAS--VSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL
        MAK+GKLTKLKSA+K+WPS +K    + +SA+ S  +S   +LH V VG++RR Y++  D++ HPLF+ELVD+SS  S  +EQ + +VV+CEVVLFEHLL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASAS--VSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL

Query:  WMLENAATQLGSADELVEFYT
        WML+ +  + GS +EL EFYT
Subjt:  WMLENAATQLGSADELVEFYT

Q9LQI6 Auxin-responsive protein SAUR776.2e-2650Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHL
        MA  GKLTKLKSAIK+WPS++K   S   +AS +VS  +    LH V VG+SRR Y++ S V+ HPLF+EL+D+SS   ++    + ++V+CEVVLFEHL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHL

Query:  LWMLENAAT--------QLGSADELVEFYT
        LWML+N+++        + GS +EL EFYT
Subjt:  LWMLENAAT--------QLGSADELVEFYT

Q9SA49 Auxin-responsive protein SAUR415.1e-0431.46Show/hide
Query:  AAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM-----------LENAATQLGSADELV
        A H+ PV VG    R++V +++++HP+F  L+++S+ E    ++G  L + C V++FE ++             LEN    L S DEL+
Subjt:  AAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWM-----------LENAATQLGSADELV

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family4.4e-2750Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHL
        MA  GKLTKLKSAIK+WPS++K   S   +AS +VS  +    LH V VG+SRR Y++ S V+ HPLF+EL+D+SS   ++    + ++V+CEVVLFEHL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAA---HLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHL

Query:  LWMLENAAT--------QLGSADELVEFYT
        LWML+N+++        + GS +EL EFYT
Subjt:  LWMLENAAT--------QLGSADELVEFYT

AT1G72430.1 SAUR-like auxin-responsive protein family6.8e-2854.55Show/hide
Query:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASAS--VSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL
        MAK+GKLTKLKSA+K+WPS +K    + +SA+ S  +S   +LH V VG++RR Y++  D++ HPLF+ELVD+SS  S  +EQ + +VV+CEVVLFEHLL
Subjt:  MAKLGKLTKLKSAIKRWPSISKLARSAPASASAS--VSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLL

Query:  WMLENAATQLGSADELVEFYT
        WML+ +  + GS +EL EFYT
Subjt:  WMLENAATQLGSADELVEFYT

AT2G35290.1 unknown protein5.6e-0632.5Show/hide
Query:  VLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVV---SCEVVLFEHLLWMLENAATQLGSAD--ELVEFY
        V+VG+ ++ ++V   V++   FR L+  +   + +     G VV     + +LFEHLLW+L N A+     D  E++EFY
Subjt:  VLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVV---SCEVVLFEHLLWMLENAATQLGSAD--ELVEFY

AT3G12955.1 SAUR-like auxin-responsive protein family3.7e-1040Show/hide
Query:  SKLARSAPASASASVSSA---AHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSG-ESDDMEQGQGLV-VSCEVVLFEHLLWMLE--NAATQLGSADE
        SK AR  P      V  +   +    VLVGR+++ YL+    + HPL   LV+K    E DD E G  ++ V CEVVLF+HLLWMLE  +    L S D+
Subjt:  SKLARSAPASASASVSSA---AHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSG-ESDDMEQGQGLV-VSCEVVLFEHLLWMLE--NAATQLGSADE

Query:  LVEFY
            Y
Subjt:  LVEFY

AT5G20820.1 SAUR-like auxin-responsive protein family2.8e-1850Show/hide
Query:  MAKLG-KLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHP------VLVGRSRRRYLVGSDVVDHPLFREL--VDKSSGESDDMEQGQGLVVSCEV
        MAK G KL KLKS +K+  S +      PA  + S SSA    P      V VGR+RR Y V SDVV HPLF++L  VD   G  D       + VSCEV
Subjt:  MAKLG-KLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHP------VLVGRSRRRYLVGSDVVDHPLFREL--VDKSSGESDDMEQGQGLVVSCEV

Query:  VLFEHLLWMLENA---ATQLGSADELVEFY
        VLFEHLLWMLENA    ++  S  ELVEFY
Subjt:  VLFEHLLWMLENA---ATQLGSADELVEFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCTCGGCAAGCTCACAAAACTCAAATCCGCCATCAAACGCTGGCCCTCCATCTCCAAGCTCGCCCGCTCCGCCCCCGCCTCCGCCTCCGCCTCCGTCTCCTC
CGCCGCCCACCTCCACCCGGTCCTCGTCGGCAGGTCCCGCCGCCGCTACCTCGTCGGCTCCGACGTCGTCGACCACCCGCTCTTCCGTGAGCTGGTTGACAAGTCGTCCG
GGGAATCCGACGACATGGAGCAGGGGCAGGGGCTTGTCGTCTCCTGCGAGGTGGTGCTGTTCGAGCACTTGTTGTGGATGCTAGAAAATGCCGCCACTCAGCTGGGCTCC
GCCGACGAGCTCGTCGAATTCTACACA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCTCGGCAAGCTCACAAAACTCAAATCCGCCATCAAACGCTGGCCCTCCATCTCCAAGCTCGCCCGCTCCGCCCCCGCCTCCGCCTCCGCCTCCGTCTCCTC
CGCCGCCCACCTCCACCCGGTCCTCGTCGGCAGGTCCCGCCGCCGCTACCTCGTCGGCTCCGACGTCGTCGACCACCCGCTCTTCCGTGAGCTGGTTGACAAGTCGTCCG
GGGAATCCGACGACATGGAGCAGGGGCAGGGGCTTGTCGTCTCCTGCGAGGTGGTGCTGTTCGAGCACTTGTTGTGGATGCTAGAAAATGCCGCCACTCAGCTGGGCTCC
GCCGACGAGCTCGTCGAATTCTACACA
Protein sequenceShow/hide protein sequence
MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWMLENAATQLGS
ADELVEFYT