; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016165 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016165
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein SA
Genome locationscaffold9_2:831830..834010
RNA-Seq ExpressionMS016165
SyntenyMS016165
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144441.1 40S ribosomal protein SA isoform X1 [Cucumis sativus]8.0e-16091.61Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE
        VDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A     PPVSNVEW+QEPV   A+DGWDAA PPPAP+ E
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE

Query:  GGAPPASGWF
        GGAP AS WF
Subjt:  GGAPPASGWF

XP_008460336.2 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]8.0e-16092.56Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG
        VDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEPVA  A+DGWDAAVPPPAPA EG
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG

Query:  GAPPASGWF
        GAP AS WF
Subjt:  GAPPASGWF

XP_022152685.1 40S ribosomal protein SA-like [Momordica charantia]7.0e-17299.67Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
        VDLFFYREPEEAKEQEEEEAVA PDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP

Query:  ASGWF
        ASGWF
Subjt:  ASGWF

XP_022155491.1 40S ribosomal protein SA-like [Momordica charantia]1.4e-15992.83Show/hide
Query:  MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT  A PRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA
        MVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVASDQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAPAV+  A
Subjt:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA

Query:  PPASGWF
        PPA+ WF
Subjt:  PPASGWF

XP_038903491.1 40S ribosomal protein SA-like [Benincasa hispida]9.5e-16192.53Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPA---AAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG
        VDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G A LV+SDQWAGQISDAQWGAPDVVPA     APPV NVEW+QEPVA  A+DGWDAAVPPPAP+ EGG
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPA---AAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG

Query:  APPASGWF
        APPA+ WF
Subjt:  APPASGWF

TrEMBL top hitse value%identityAlignment
A0A0A0L946 40S ribosomal protein SA3.9e-16091.61Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE
        VDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A     PPVSNVEW+QEPV   A+DGWDAA PPPAP+ E
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE

Query:  GGAPPASGWF
        GGAP AS WF
Subjt:  GGAPPASGWF

A0A1S3CDH5 40S ribosomal protein SA3.9e-16092.56Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGH+WDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG
        VDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASDQWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEPVA  A+DGWDAAVPPPAPA EG
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG

Query:  GAPPASGWF
        GAP AS WF
Subjt:  GAPPASGWF

A0A6J1DEM6 40S ribosomal protein SA3.4e-17299.67Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
        VDLFFYREPEEAKEQEEEEAVA PDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
Subjt:  VDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP

Query:  ASGWF
        ASGWF
Subjt:  ASGWF

A0A6J1DWT5 40S ribosomal protein SA6.6e-16092.83Show/hide
Query:  MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT  A PRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA
        MVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVASDQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAPAV+  A
Subjt:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA

Query:  PPASGWF
        PPA+ WF
Subjt:  PPASGWF

A0A6J1IX68 40S ribosomal protein SA7.3e-15991.94Show/hide
Query:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATAT PRQLSQKEADIQMMLA+EVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVM

Query:  VDLFFYREPEEAKEQEEEEAVAPP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE
        VDLFFYREPEEAKE+EEEEA+A P DYGIADFGAAPLV SDQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEPVA  ++DGW AAVPPPAP+VE
Subjt:  VDLFFYREPEEAKEQEEEEAVAPP-DYGIADFGAAPLVASDQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE

Query:  GGAPPASGWF
        GGAPPA+ WF
Subjt:  GGAPPASGWF

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA1.4e-13078.03Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPL--VASDQWAGQISDA-QWGAPDVVPAAAAPPVSNVEW-------SQEPVATGAADGWDAAVPPPA--
        FFYREPEE KEQE +E VA PDYGI D+ A  L  +    W   I+DA QWGA DV   A  P V    W       S  P+AT   DGWDAA  PP   
Subjt:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPL--VASDQWAGQISDA-QWGAPDVVPAAAAPPVSNVEW-------SQEPVATGAADGWDAAVPPPA--

Query:  -PAVEGGAPPASGW
         P V  G PP +GW
Subjt:  -PAVEGGAPPASGW

O22518 40S ribosomal protein SA5.8e-12979.55Show/hide
Query:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMV

Query:  DLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADG-WDAAVPPP--APAVEGGA
        DLFFYREPEEAK+QEEEEA A  DY I DF A  + A  QW G I D  W   D VP    P V  V W     A  AA G W  AVPPP   P    G 
Subjt:  DLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADG-WDAAVPPP--APAVEGGA

Query:  PPA--SGW
             SGW
Subjt:  PPA--SGW

O65751 40S ribosomal protein SA3.9e-12576.55Show/hide
Query:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG--
        MVDLFFYREPEEAK+ EE+E VA PDY IADF  + + +  QW   I D  W   D VP    P V  V W+      G    W  AVPPP      G  
Subjt:  MVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG--

Query:  APPASGW
        + PA+GW
Subjt:  APPASGW

O80377 40S ribosomal protein SA9.3e-12777.56Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQE-PVATGAADGWDAAVPPPAPAVEG-GAPPA
        FFYREPEE K+QEEE+ +   DY +AD+ AAP+  +DQW   I DAQWG   V PA +A P     W+   P+   A DGWDAA  PP P   G   P  
Subjt:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQE-PVATGAADGWDAAVPPPAPAVEG-GAPPA

Query:  SGW
        +GW
Subjt:  SGW

Q08682 40S ribosomal protein Sa-12.0e-12173.29Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG
        VMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QI DA W      P +AAP  ++  WS +  A  A  GW+AA PP        
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG

Query:  APPASGW
          PA+GW
Subjt:  APPASGW

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA1.4e-12273.29Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG
        VMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QI DA W      P +AAP  ++  WS +  A  A  GW+AA PP        
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG

Query:  APPASGW
          PA+GW
Subjt:  APPASGW

AT1G72370.2 40s ribosomal protein SA5.4e-12272.96Show/hide
Query:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
        MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA
Subjt:  MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG
        VMVDLFFYREPEE K ++E+EA    +YG        +V  DQW   QI DA W      P +AAP  ++  WS       A  GW+AA PP        
Subjt:  VMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG

Query:  APPASGW
          PA+GW
Subjt:  APPASGW

AT3G04770.1 40s ribosomal protein SA B8.7e-10489.45Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B1.9e-11975.43Show/hide
Query:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG
        ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAG
Subjt:  ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPA
        FFYREPEEAK++ +EEA    DYG        +V  DQW   QISDA W      P +AAP           V    A GW+AA  P A
Subjt:  FFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCAACAGCACCGCGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTC
AAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTC
ACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAAT
AGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGG
TTCTACAGATGCGTGGAACAATTCGTGCCGGGCATAAGTGGGACGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCT
GTTGCGCCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCCGATGCTCAGTGGGGTGCTCCTGATGTGGT
TCCAGCTGCTGCTGCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTACAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAG
TTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGCAACAGCACCGCGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTC
AAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTC
ACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAAT
AGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGG
TTCTACAGATGCGTGGAACAATTCGTGCCGGGCATAAGTGGGACGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCT
GTTGCGCCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCCGATGCTCAGTGGGGTGCTCCTGATGTGGT
TCCAGCTGCTGCTGCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTACAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAG
TTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC
Protein sequenceShow/hide protein sequence
MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEA
VAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPPASGWF