; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016176 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016176
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-conjugating enzyme E2 34
Genome locationscaffold9_2:897212..897771
RNA-Seq ExpressionMS016176
SyntenyMS016176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606678.1 hypothetical protein SDJN03_00020, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5980.39Show/hide
Query:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA  ST+EE GRKWL Q KKSKKSWK T+FSWL SDK SK LPK E N  HTS+KR VHVSGPIYTGAT
Subjt:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT

Query:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

XP_011651731.1 uncharacterized protein LOC101209455 [Cucumis sativus]6.6e-6075.46Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        M KS+S D EM++PGFD+FD  L+FSKFLEEAKHHAT Q FKA+ S EEE  RKWL QEKK+KKSWK T+FSWLKSDKKSK LPKPE N PHT +KR V+
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGPIY+ A T DGRPRRRP SGPIASLFNP+MRTE EIPYMCLHQL++PN++ NYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

XP_022152626.1 uncharacterized protein LOC111020302 [Momordica charantia]1.8e-8699.39Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGPIYTGA TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

XP_022949073.1 uncharacterized protein LOC111452535 [Cucurbita moschata]2.8e-5879.74Show/hide
Query:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA  ST+EE GRKWL Q KKSKKSWK T+FSWL SDK SK LPK E N  HTS+KR VHVSG IYTGAT
Subjt:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT

Query:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

XP_038895377.1 uncharacterized protein LOC120083617 [Benincasa hispida]1.3e-6379.14Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        M KSVSPD EMDDPGFD+ D  L+FSKFL+EAK HA  QDFKA  STEEE GRKWL QEKKSKKSWK T+FSWLKS+KK+KP+PKPE N PHT +KR VH
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGPIYTGATTTD RPRR P SGPIASLFNPSMRT+MEIPYM LHQL +PNS+H YGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0LC20 Uncharacterized protein3.2e-6075.46Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        M KS+S D EM++PGFD+FD  L+FSKFLEEAKHHAT Q FKA+ S EEE  RKWL QEKK+KKSWK T+FSWLKSDKKSK LPKPE N PHT +KR V+
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGPIY+ A T DGRPRRRP SGPIASLFNP+MRTE EIPYMCLHQL++PN++ NYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

A0A1S3CDK1 uncharacterized protein LOC103499209 isoform X21.9e-5774.85Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        M KS S D EM++ GFD+FD  L+FS FLEEAKHHAT Q  KA+ S EEE GRK L QEKK+KKSWK T+FSWLKSDKKSK LPKPE N PHT +KR V+
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGP+Y+ ATTT+GRPRRRP SGPIASLFNPSMRTE EIPYMCL QL++PNS+HNYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

A0A5D3D6L0 Uncharacterized protein1.5e-5774.85Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        M KS S D EM++ GFD+FD  L+FS FLEEAKHHAT Q  KA+ S EEE GRK L QEKK+KKSWK T+FSWLKSDKKSK LPKPE N PHT +KR V+
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGP+Y+ ATTT+GRPRRRP SGPIASLFNPSMRTE EIPYMCL QL++PNS+HNYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

A0A6J1DIA9 uncharacterized protein LOC1110203028.9e-8799.39Show/hide
Query:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
        MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH
Subjt:  MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVH

Query:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        VSGPIYTGA TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
Subjt:  VSGPIYTGATTTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

A0A6J1GB15 uncharacterized protein LOC1114525351.3e-5879.74Show/hide
Query:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT
        MDDP FD+FDPR +FSKFLEEAKHHA  +DFKA  ST+EE GRKWL Q KKSKKSWK T+FSWL SDK SK LPK E N  HTS+KR VHVSG IYTGAT
Subjt:  MDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT

Query:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT
        T DGRPR RPTSGPIASLFNPSMRTEMEIPYMCLHQLTSP  +H YGPIYLVT
Subjt:  TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAATCTGTTTCTCCTGATCTCGAGATGGATGATCCTGGTTTTGATGAATTTGATCCTCGCCTTAGCTTTTCCAAGTTCTTGGAAGAAGCAAAACATCACGCCAC
AGTACAAGATTTCAAAGCCTCAAAGTCAACAGAAGAAGAAGCAGGAAGGAAATGGTTGGGGCAAGAGAAAAAGAGCAAGAAATCATGGAAAACCACCATCTTCTCGTGGT
TGAAAAGTGACAAAAAGAGCAAGCCTCTGCCCAAACCAGAAATAAATCATCCTCACACATCCAGTAAAAGACTTGTTCATGTTTCTGGTCCGATTTACACCGGAGCTACG
ACCACCGACGGCAGACCCCGCCGCCGCCCGACGTCTGGACCGATCGCTAGTCTCTTCAACCCCAGTATGAGGACGGAGATGGAGATCCCTTATATGTGTCTCCACCAGCT
TACCAGTCCCAATTCTAGTCATAATTATGGTCCAATTTATCTGGTTACA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAATCTGTTTCTCCTGATCTCGAGATGGATGATCCTGGTTTTGATGAATTTGATCCTCGCCTTAGCTTTTCCAAGTTCTTGGAAGAAGCAAAACATCACGCCAC
AGTACAAGATTTCAAAGCCTCAAAGTCAACAGAAGAAGAAGCAGGAAGGAAATGGTTGGGGCAAGAGAAAAAGAGCAAGAAATCATGGAAAACCACCATCTTCTCGTGGT
TGAAAAGTGACAAAAAGAGCAAGCCTCTGCCCAAACCAGAAATAAATCATCCTCACACATCCAGTAAAAGACTTGTTCATGTTTCTGGTCCGATTTACACCGGAGCTACG
ACCACCGACGGCAGACCCCGCCGCCGCCCGACGTCTGGACCGATCGCTAGTCTCTTCAACCCCAGTATGAGGACGGAGATGGAGATCCCTTATATGTGTCTCCACCAGCT
TACCAGTCCCAATTCTAGTCATAATTATGGTCCAATTTATCTGGTTACA
Protein sequenceShow/hide protein sequence
MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEKKSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAT
TTDGRPRRRPTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT