; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016197 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016197
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYB transcription factor 2
Genome locationscaffold9_2:1023829..1024376
RNA-Seq ExpressionMS016197
SyntenyMS016197
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606693.1 Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5897.37Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKK+NQ SE
Subjt:  WNSHLSKKINQQSE

XP_022153490.1 transcription factor MYB114-like [Momordica charantia]1.3e-59100Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKKINQQSE
Subjt:  WNSHLSKKINQQSE

XP_022948466.1 transcription factor MYB114-like [Cucurbita moschata]3.3e-5897.37Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKK+NQ SE
Subjt:  WNSHLSKKINQQSE

XP_022998619.1 transcription factor MYB114-like [Cucurbita maxima]2.8e-5796.49Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        +RN VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKK+NQ SE
Subjt:  WNSHLSKKINQQSE

XP_038878481.1 transcription factor MYB3-like [Benincasa hispida]2.1e-5797.39Show/hide
Query:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
        MRN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
Subjt:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN

Query:  YWNSHLSKKINQQSE
        YWNSHLSKK+NQQSE
Subjt:  YWNSHLSKKINQQSE

TrEMBL top hitse value%identityAlignment
A0A5D3C7H7 Transcription factor MYB114-like protein5.1e-5795.65Show/hide
Query:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
        +RN GVNKGAWTAEEDQKLA+VIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
Subjt:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN

Query:  YWNSHLSKKINQQSE
        YWNSHLSKK+NQQSE
Subjt:  YWNSHLSKKINQQSE

A0A6J1DGZ8 transcription factor MYB114-like6.5e-60100Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKKINQQSE
Subjt:  WNSHLSKKINQQSE

A0A6J1G9A5 transcription factor MYB114-like1.6e-5897.37Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKK+NQ SE
Subjt:  WNSHLSKKINQQSE

A0A6J1GUA9 transcription factor MYB114-like5.1e-5796.52Show/hide
Query:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
        MRN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN
Subjt:  MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKN

Query:  YWNSHLSKKINQQSE
        YWNSHLSKK+N QSE
Subjt:  YWNSHLSKKINQQSE

A0A6J1KET2 transcription factor MYB114-like1.4e-5796.49Show/hide
Query:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
        +RN VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY
Subjt:  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNY

Query:  WNSHLSKKINQQSE
        WNSHLSKK+NQ SE
Subjt:  WNSHLSKKINQQSE

SwissProt top hitse value%identityAlignment
A0A2R6PN00 Transcription factor MYB1232.6e-4269.64Show/hide
Query:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW
        + G+ +GAWTA ED+ L   I  HG  +W+ +  +AGL RCGKSCRLRWLNYLRP+IKRGNIS +EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYW
Subjt:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW

Query:  NSHLSKKINQQS
        N+ L KKI  Q+
Subjt:  NSHLSKKINQQS

A0A4D6Q411 Transcription factor MYB12.0e-4266.96Show/hide
Query:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW
        + G+N+GAW + ED+ L   I  HG  +W+++  +AGL RCGKSCRLRWLNYLRP IKRGNIS+ EEDLI+RLH LLGNRWSLIAGRLPGRTDNEIKNYW
Subjt:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW

Query:  NSHLSKKINQQS
        N++L ++++ QS
Subjt:  NSHLSKKINQQS

A0A4D6Q4S0 Transcription factor MYB12.8e-4470.54Show/hide
Query:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW
        + G+N+GAW+A ED+ L + I  HG  +W+ +  +AGL RCGKSCRLRWLNYLRP+IKRGNIS  EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYW
Subjt:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW

Query:  NSHLSKKINQQS
        N++LSKK+N Q+
Subjt:  NSHLSKKINQQS

A0A4D6Q5I0 Transcription factor MYB47.4e-4575Show/hide
Query:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH
        VN+G WTAEED+KL   ++ HG K+W+ + AKAGL RCGKSCRLRWLNYLRP IKRGNIS+ EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+H
Subjt:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH

Query:  LSKK
        LSK+
Subjt:  LSKK

A0A4D6QCQ2 Transcription factor MYB37.4e-4575Show/hide
Query:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH
        VN+G WTAEED+KL   ++ HG K+W+ + AKAGL RCGKSCRLRWLNYLRP IKRGNIS+ EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+H
Subjt:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH

Query:  LSKK
        LSK+
Subjt:  LSKK

Arabidopsis top hitse value%identityAlignment
AT1G22640.1 myb domain protein 32.3e-4165.71Show/hide
Query:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH
        +NKGAWT EEDQ L + I  HG   W+++   AGL RCGKSCRLRW+NYLRP++KRGN +++E++LI++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H
Subjt:  VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSH

Query:  LSKKI
        + +K+
Subjt:  LSKKI

AT3G13540.1 myb domain protein 51.3e-4166.97Show/hide
Query:  GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNS
        G+ +G WT EED+ L   I   G  RW+++  +AGL RCGKSCRLRW+NYLRP++KRG I+  EEDLILRLH+LLGNRWSLIAGR+PGRTDNEIKNYWN+
Subjt:  GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNS

Query:  HLSKKINQQ
        HL KK+ +Q
Subjt:  HLSKKINQQ

AT5G14750.1 myb domain protein 661.6e-4268.22Show/hide
Query:  NGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWN
        N   KG WT EED+ L + +  HG   W  IA K GL RCGKSCRLRW+NYL PN+KRGN ++QEEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN
Subjt:  NGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWN

Query:  SHLSKKI
        +HLSKK+
Subjt:  SHLSKKI

AT5G35550.1 Duplicated homeodomain-like superfamily protein2.3e-4168.52Show/hide
Query:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW
        R  +N+GAWT  ED+ L + I  HG  +W T+  +AGL RCGKSCRLRW NYLRP IKRGNIS  EE+LI+RLH LLGNRWSLIAGRLPGRTDNEIKN+W
Subjt:  RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYW

Query:  NSHLSKKI
        NS+L K++
Subjt:  NSHLSKKI

AT5G40330.1 myb domain protein 236.0e-4269.9Show/hide
Query:  KGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLS
        KG WT EED+ L + +  HG   W  IA K GL RCGKSCRLRW+NYL PN+ RGN +DQEEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLS
Subjt:  KGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLS

Query:  KKI
        KK+
Subjt:  KKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGC
AGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGC
TCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAAC
CAACAGAGTGAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGC
AGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGC
TCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAAC
CAACAGAGTGAA
Protein sequenceShow/hide protein sequence
MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIN
QQSE