CuGenDBv2

Gene ID	MS016199
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S3
Genome location	scaffold9_2:1028783..1030995
RNA-Seq Expression	MS016199
Synteny	MS016199
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6606695.1 40S ribosomal protein S3-3, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-116

96.48

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDA-PLPPATEIDI
        IHTPKEEE++I+PS A PLPPA EI+I
Subjt:  IHTPKEEEEYIKPSDA-PLPPATEIDI

KAG7036415.1 40S ribosomal protein S3-3 [Cucurbita argyrosperma subsp. argyrosperma]

8.9e-114

90.87

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCE--------------VIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPK
        LGGLAVRRACYGVLRFVMESGAKGCE              VIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPK
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCE--------------VIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPK

Query:  GKQGPTTPLPDLVTIHTPKEEEEYIKPSDA-PLPPATEIDI
        GKQGPTTPLPDLVTIHTPKEEE++I+PS A PLPPA EI+I
Subjt:  GKQGPTTPLPDLVTIHTPKEEEEYIKPSDA-PLPPATEIDI

XP_010273935.1 PREDICTED: 40S ribosomal protein S3-3-like [Nelumbo nucifera]

3.7e-112

93.42

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP  +YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDITA
        IHTPKEEEEYIKPS      AT+I++ A
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDITA

XP_022153494.1 40S ribosomal protein S3-3-like [Momordica charantia]

1.8e-122

99.13

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEV+VSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDITAE
        IHTPKEEEEYIKPSDAPLPPATEIDITAE
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDITAE

XP_022998570.1 40S ribosomal protein S3-3-like [Cucurbita maxima]

2.5e-116

96.04

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPC+DYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDA-PLPPATEIDI
        IHTPKEEE++I+PS A PLPPA EI+I
Subjt:  IHTPKEEEEYIKPSDA-PLPPATEIDI

TrEMBL top hits

e value

%identity

Alignment

A0A1U8B035 40S ribosomal protein S3-3-like

1.8e-112

93.42

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP  +YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDITA
        IHTPKEEEEYIKPS      AT+I++ A
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDITA

A0A6A6KE30 KH type-2 domain-containing protein

2.4e-112

94.25

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP KDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDI
        IH PKEEEEY++P  A  P   EID+
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDI

A0A6J1DJ79 40S ribosomal protein S3-3-like

8.6e-123

99.13

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEV+VSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDITAE
        IHTPKEEEEYIKPSDAPLPPATEIDITAE
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDITAE

A0A6J1HKZ2 40S ribosomal protein S3-3

3.1e-112

92.98

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP K+YIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP TPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEIDITA
        IHTPKEEEE+I+P  A + P  EI++ A
Subjt:  IHTPKEEEEYIKPSDAPLPPATEIDITA

A0A6J1KCW3 40S ribosomal protein S3-3-like

1.2e-116

96.04

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPC+DYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDA-PLPPATEIDI
        IHTPKEEE++I+PS A PLPPA EI+I
Subjt:  IHTPKEEEEYIKPSDA-PLPPATEIDI

SwissProt top hits

e value

%identity

Alignment

E2RH47 40S ribosomal protein S3

5.8e-92

84.06

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P   Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD V+
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEE
        I  PK+E
Subjt:  IHTPKEE

P02350 40S ribosomal protein S3-A

1.2e-92

78.6

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P   Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP  PLPD V+
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEE--------EEYIKPSDAPLPPA
        I  PK+E        E+     D P PPA
Subjt:  IHTPKEE--------EEYIKPSDAPLPPA

Q9FJA6 40S ribosomal protein S3-3

4.9e-107

84.68

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSD-------APLPPATEIDITA
        IHTPKE++ YI P+         P  P T  D  A
Subjt:  IHTPKEEEEYIKPSD-------APLPPATEIDITA

Q9M339 40S ribosomal protein S3-2

4.1e-106

87.11

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEID
        IH+PKEEE    P+    P A   D
Subjt:  IHTPKEEEEYIKPSDAPLPPATEID

Q9SIP7 40S ribosomal protein S3-1

3.5e-105

84.48

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLP-------PATEID
        IH PK++  Y  P+ A  P       P T +D
Subjt:  IHTPKEEEEYIKPSDAPLP-------PATEID

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

2.5e-106

84.48

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLP-------PATEID
        IH PK++  Y  P+ A  P       P T +D
Subjt:  IHTPKEEEEYIKPSDAPLP-------PATEID

AT3G53870.1 Ribosomal protein S3 family protein

2.9e-107

87.11

Show/hide

Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSDAPLPPATEID
        IH+PKEEE    P+    P A   D
Subjt:  IHTPKEEEEYIKPSDAPLPPATEID

AT5G35530.1 Ribosomal protein S3 family protein

3.5e-108

84.68

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Query:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL
        +FVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKL
Subjt:  QFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL

Query:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT
        LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP K+YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP TPLPD+V 
Subjt:  LGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVT

Query:  IHTPKEEEEYIKPSD-------APLPPATEIDITA
        IHTPKE++ YI P+         P  P T  D  A
Subjt:  IHTPKEEEEYIKPSD-------APLPPATEIDITA

Sequences

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CDS sequence

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ATATGTATTTTGGTTCTTAATTTGTTACAGTTTGTCGCCGATGGAGTTTTTTTCGCTGAGCTCAACGAGGTGCTGACCAGAGAGCTAGCCGAGGACGGCTACTCCGGTGT
CGAGGTTAGGGTTACGCCGATGCGTACTGAGATTATAATCAGGGCAACTAGGACACAAAATGTTCTAGGTGAGAAGGGAAGAAGAATCAGAGAATTGACATCTGTTGTTC
AAAAGCGATTTAAATTCCCTGAGAATAGTGTCGAACTCTATGCTGAAAAGGTCAACAACAGAGGTCTATGTGCTATTGCTCAGGCTGAGTCCCTGCGTTACAAGCTTCTT
GGAGGGCTTGCTGTCAGGAGAGCTTGCTATGGTGTTCTTAGATTTGTCATGGAGAGCGGGGCGAAGGGATGTGAGGTCATTGTTAGTGGTAAGCTCAGGGCACAGCGTGC
AAAGTCTATGAAGTTCAAGGATGGATATATGATATCCTCCGGTCAGCCTTGCAAAGATTATATTGACTCTGCCGTGAGGCATGTCCTCTTGAGACAGGGTGTTCTTGGGA
TCAAGGTCAAGATCATGCTTGACTGGGATCCTAAGGGTAAGCAAGGACCGACCACTCCTTTGCCTGATTTGGTTACCATCCACACACCTAAGGAGGAGGAAGAATATATC
AAGCCATCAGATGCACCTCTACCACCAGCCACTGAGATAGATATTACAGCCGAG

mRNA sequence

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Protein sequence

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ICILVLNLLQFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPCKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYI
KPSDAPLPPATEIDITAE

MS016199 (gene) of Bitter gourd (TR) v1 genome