; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016202 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016202
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand
Genome locationscaffold9_2:1046446..1046871
RNA-Seq ExpressionMS016202
SyntenyMS016202
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650949.1 hypothetical protein Csa_002692 [Cucumis sativus]2.9e-6490.14Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV++DGSTV+NFV+DESHF KS+D AFA+LDLN DGVLSRSELRKAFETLRLIETH+GVDVATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKL Q+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

KAG7018108.1 hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-6491.49Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV+IDGSTV+NFV+DESHF+KSVD AFAALDLN DGVLSRSELRKAFETLRLIETH+GVDV T PE+LTQLYDSIFEKFDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQ+S
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAS

XP_004153292.1 uncharacterized protein LOC101213961 [Cucumis sativus]2.9e-6490.14Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV++DGSTV+NFV+DESHF KS+D AFA+LDLN DGVLSRSELRKAFETLRLIETH+GVDVATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKL Q+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

XP_022153410.1 uncharacterized protein LOC111020923 [Momordica charantia]1.8e-6999.3Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLE SKLAQAST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

XP_038905172.1 uncharacterized protein LOC120091281 [Benincasa hispida]1.6e-6592.25Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV+IDGSTV+NFV+DESHF+KS+D AFAALDLN DGVLSRSELRKAFETLRLIETH+GVDV TTPEQLTQLYDSIFE+FDCDKSGTVDADEFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQ+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

TrEMBL top hitse value%identityAlignment
A0A0A0L9X6 Uncharacterized protein1.4e-6490.14Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV++DGSTV+NFV+DESHF KS+D AFA+LDLN DGVLSRSELRKAFETLRLIETH+GVDVATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKL Q+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

A0A1S3CGR2 uncharacterized protein LOC1035002827.1e-6489.44Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV+IDGSTV+NFV+DE HF KS+D AFA+LDLN DGVLSRSELRKAFETLRLIETH+GVDVATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGD+SFLKQAADLEASKL Q+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

A0A5A7UE76 Calcium-binding EF-hand7.1e-6489.44Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV+IDGSTV+NFV+DE HF KS+D AFA+LDLN DGVLSRSELRKAFETLRLIETH+GVDVATTPEQLTQLYDSIFE+FDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGD+SFLKQAADLEASKL Q+ST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

A0A6J1DGS0 uncharacterized protein LOC1110209238.6e-7099.3Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLE SKLAQAST
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

A0A6J1F6Q4 uncharacterized protein LOC1114413773.2e-6491.49Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        MAVV+IDGSTV+NFV+DESHF+KSVD AFAALDLN DGVLSRSELRKAFETLRLIETH+GVDV T PE+LTQLYDSIFEKFDCDKSGTVDA+EFRTEMKN
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAS
        ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQ+S
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein4.9e-0931.15Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        M   +I   T+  F+ D   F+   +  F  LDL+K+G+LS SELR+    +  +E+          ++   +Y++IFE+F  D    +    FR  +  
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMAL-DDG
        IL A+A G+G+SP+ M + +DG
Subjt:  ILLAIADGLGSSPIQMAL-DDG

AT2G44310.1 Calcium-binding EF-hand family protein3.8e-5473.24Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        M VV+IDGSTV++FVDDE  F+KSVD  FAALDLNKDGVLSRSELRKAFE++RL+E+H+GVDV T  ++LT LYDSIFEKFD D+SG+VD +EFR+EMK 
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST
        I+LAIADGLGS PI M LDD D +FLK+AADLEASKL +AS+
Subjt:  ILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQAST

AT4G38810.2 Calcium-binding EF-hand family protein8.4e-0930.51Show/hide
Query:  IIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKNILLA
        ++DGS +   V++E  F K V+  F  LD ++DG LS +EL+ A      I    G+    T      +Y  +  +F       V   EF+  + +ILL 
Subjt:  IIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKNILLA

Query:  IADGLGSSPIQMALDDGD
        +A GL   PI +   DG+
Subjt:  IADGLGSSPIQMALDDGD

AT5G28830.1 calcium-binding EF hand family protein2.6e-1031.09Show/hide
Query:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN
        + V I+DG+ +K F++DE  F    ++ F  LD    G L +SE+RKA         H GV++   P     + D I +K D D    +   +F   ++ 
Subjt:  MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKN

Query:  ILLAIADGLGSSPIQMALD
        +L  IAD L   PI + L+
Subjt:  ILLAIADGLGSSPIQMALD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTCATAATCGACGGATCGACGGTGAAGAACTTCGTGGACGACGAATCTCACTTCCAGAAGAGTGTGGACAGCGCCTTCGCGGCTCTGGATCTGAACAAGGA
CGGCGTTCTGTCCCGATCGGAGCTCCGGAAGGCGTTCGAAACGCTCCGCCTGATCGAGACTCACTACGGCGTCGACGTCGCCACCACGCCGGAGCAACTCACTCAGCTCT
ACGATTCCATCTTCGAGAAGTTCGATTGCGACAAAAGCGGCACCGTCGATGCGGATGAGTTCCGCACCGAGATGAAGAACATCTTGCTCGCCATAGCCGACGGATTGGGC
TCCTCGCCGATTCAGATGGCGCTCGACGACGGCGATCAGAGTTTCCTCAAGCAAGCTGCGGATCTCGAGGCTTCCAAGCTCGCTCAAGCTTCTACC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGTCATAATCGACGGATCGACGGTGAAGAACTTCGTGGACGACGAATCTCACTTCCAGAAGAGTGTGGACAGCGCCTTCGCGGCTCTGGATCTGAACAAGGA
CGGCGTTCTGTCCCGATCGGAGCTCCGGAAGGCGTTCGAAACGCTCCGCCTGATCGAGACTCACTACGGCGTCGACGTCGCCACCACGCCGGAGCAACTCACTCAGCTCT
ACGATTCCATCTTCGAGAAGTTCGATTGCGACAAAAGCGGCACCGTCGATGCGGATGAGTTCCGCACCGAGATGAAGAACATCTTGCTCGCCATAGCCGACGGATTGGGC
TCCTCGCCGATTCAGATGGCGCTCGACGACGGCGATCAGAGTTTCCTCAAGCAAGCTGCGGATCTCGAGGCTTCCAAGCTCGCTCAAGCTTCTACC
Protein sequenceShow/hide protein sequence
MAVVIIDGSTVKNFVDDESHFQKSVDSAFAALDLNKDGVLSRSELRKAFETLRLIETHYGVDVATTPEQLTQLYDSIFEKFDCDKSGTVDADEFRTEMKNILLAIADGLG
SSPIQMALDDGDQSFLKQAADLEASKLAQAST