CuGenDBv2

Gene ID	MS016217
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold9_2:1133928..1134212
RNA-Seq Expression	MS016217
Synteny	MS016217
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011651806.1 uncharacterized protein LOC101216392 [Cucumis sativus]

5.2e-41

94.74

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

XP_016902957.1 PREDICTED: uncharacterized protein LOC103501213 [Cucumis melo]

2.0e-40

93.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

XP_022153454.1 uncharacterized protein LOC111020959 [Momordica charantia]

2.5e-43

100

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

XP_022948745.1 uncharacterized protein LOC111452323 [Cucurbita moschata]

2.2e-39

92.63

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWS LFNRHRFLLTALALLT LCTIYLYFAITLGATASSCSGLTGAQKELC +EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

XP_038903507.1 uncharacterized protein LOC120090090 [Benincasa hispida]

4.4e-40

92.55

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFA+TLGATASSCSGLTG Q+ELCR+EHAKASL KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9L6 Uncharacterized protein

2.5e-41

94.74

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

A0A1S4E410 uncharacterized protein LOC103501213

9.6e-41

93.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

A0A5D3DCR7 Uncharacterized protein

9.6e-41

93.68

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWS LF RHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTG Q+ELCR+EHAKASLA GKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

A0A6J1DJ35 uncharacterized protein LOC111020959

1.2e-43

100

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

A0A6J1GA22 uncharacterized protein LOC111452323

1.1e-39

92.63

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL
        MVLDSILASP RR+P+FRKQFPANELGSWS LFNRHRFLLTALALLT LCTIYLYFAITLGATASSCSGLTGAQKELC +EHAKASLAKGKLKFL
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16170.1 unknown protein

2.8e-24

60.64

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF
        MVLD +++SP RR    +KQ+  +ELGSWS L  RH++LLTALALL FLCT+YLYFA+TLGA  SSC GLTG  K +C+++  +A L+KGKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF

AT1G79660.1 unknown protein

1.4e-23

58.51

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Query:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF
        MVLD I++SP RR  + +KQ+  ++LGS S +  RHRFLLTA+ LL FLCTIY+YFA+TLGA    CSG+TG  K +C+MEH +AS + GKLKF
Subjt:  MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKF

Sequences

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CDS sequence

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ATGGTTCTTGACAGCATTCTAGCTTCTCCCCATAGGAGGTCCCCATCATTCAGAAAGCAGTTTCCTGCAAATGAGTTGGGCAGTTGGTCTGTTCTCTTCAATCGGCATCG
CTTCCTCTTAACCGCGCTGGCACTCTTGACTTTCCTTTGCACAATTTATCTCTACTTTGCAATCACTCTAGGGGCTACCGCGTCGTCTTGTTCGGGTTTGACTGGAGCTC
AGAAAGAACTGTGTCGTATGGAGCATGCTAAGGCTTCTCTGGCTAAAGGCAAATTGAAATTTCTA

mRNA sequence

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Protein sequence

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MVLDSILASPHRRSPSFRKQFPANELGSWSVLFNRHRFLLTALALLTFLCTIYLYFAITLGATASSCSGLTGAQKELCRMEHAKASLAKGKLKFL

MS016217 (gene) of Bitter gourd (TR) v1 genome