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MS016220 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016220
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNB-ARC domain-containing protein
Genome locationscaffold9_2:1154303..1154561
RNA-Seq ExpressionMS016220
SyntenyMS016220
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606201.1 putative disease resistance protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1562.5Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS
        +ETVD S +HGVENEL+VL+KMLEK     GGNGF+AIG+ G +G+    + +AFLQNPEVKS+F+P IWVS
Subjt:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS

XP_004152419.3 probable disease resistance protein At4g19060 [Cucumis sativus]1.5e-1561.84Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLE---KTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN
        ++TVD S VHGVENEL+VLQKML+    + GGNGF+AIGI G +G+    IS+AFLQNPEVKS+F+P IW+S   N
Subjt:  SETVDRSAVHGVENELMVLQKMLE---KTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN

XP_022158636.1 probable disease resistance protein At4g19060 [Momordica charantia]9.6e-1856.86Show/hide
Query:  INDELQNPKLE----------SLGGSETVDRSAVHGVENELMVLQKMLEKTHG----GNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSF
        +N +LQN +++          S   SETVD SAVHGVENELMVLQKML K HG    G+GF+AIGI G  G+    I QAFLQNPEVKS+F+P IWVS  
Subjt:  INDELQNPKLE----------SLGGSETVDRSAVHGVENELMVLQKMLEKTHG----GNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSF

Query:  SN
        +N
Subjt:  SN

XP_022159561.1 probable disease resistance protein At4g19060 [Momordica charantia]1.1e-1858.76Show/hide
Query:  INDELQNPKLESLGG---------SETVDRSAVHGVENELMVLQKMLEKTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN
        +N ELQN ++              SETVDRSAVHGVENEL+VLQKML K HGGNGFKAIGI G  G+    IS+A LQ PEV+S+F+P IWVS   N
Subjt:  INDELQNPKLESLGG---------SETVDRSAVHGVENELMVLQKMLEKTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN

XP_022996103.1 probable disease resistance protein At4g19060 [Cucurbita maxima]1.5e-1562.5Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS
        +ETVD S +HGVENEL+VL+KMLEK     GGNGF+AIG+ G +G+    + +AFLQNPEVKS+F+P IWVS
Subjt:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS

TrEMBL top hitse value%identityAlignment
A0A0A0KKR5 NB-ARC domain-containing protein7.4e-1661.84Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLE---KTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN
        ++TVD S VHGVENEL+VLQKML+    + GGNGF+AIGI G +G+    IS+AFLQNPEVKS+F+P IW+S   N
Subjt:  SETVDRSAVHGVENELMVLQKMLE---KTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN

A0A6J1E1I2 probable disease resistance protein At4g190604.6e-1856.86Show/hide
Query:  INDELQNPKLE----------SLGGSETVDRSAVHGVENELMVLQKMLEKTHG----GNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSF
        +N +LQN +++          S   SETVD SAVHGVENELMVLQKML K HG    G+GF+AIGI G  G+    I QAFLQNPEVKS+F+P IWVS  
Subjt:  INDELQNPKLE----------SLGGSETVDRSAVHGVENELMVLQKMLEKTHG----GNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSF

Query:  SN
        +N
Subjt:  SN

A0A6J1E4A8 probable disease resistance protein At4g190605.5e-1958.76Show/hide
Query:  INDELQNPKLESLGG---------SETVDRSAVHGVENELMVLQKMLEKTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN
        +N ELQN ++              SETVDRSAVHGVENEL+VLQKML K HGGNGFKAIGI G  G+    IS+A LQ PEV+S+F+P IWVS   N
Subjt:  INDELQNPKLESLGG---------SETVDRSAVHGVENELMVLQKMLEKTHGGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVSSFSN

A0A6J1H3T7 probable disease resistance protein At4g190602.8e-1561.11Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS
        +ETVD S +HGVE+EL+VL+KMLEK     GGNGF+AIG+ G +G+    + +AFLQNPEVKS+F+P IWVS
Subjt:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS

A0A6J1K9W9 probable disease resistance protein At4g190607.4e-1662.5Show/hide
Query:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS
        +ETVD S +HGVENEL+VL+KMLEK     GGNGF+AIG+ G +G+    + +AFLQNPEVKS+F+P IWVS
Subjt:  SETVDRSAVHGVENELMVLQKMLEKTH---GGNGFKAIGIFGAKGL--KPISQAFLQNPEVKSQFIPTIWVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAACGACGAGCTGCAGAATCCAAAGCTAGAATCTCTTGGTGGTTCGGAAACTGTCGACAGATCCGCCGTGCACGGCGTCGAAAACGAGCTCATGGTTCTGCAGAAAAT
GCTCGAGAAAACACACGGCGGCAACGGCTTCAAAGCCATCGGAATCTTCGGAGCCAAAGGATTGAAACCGATTTCCCAAGCTTTTCTCCAAAACCCAGAAGTGAAATCAC
AATTTATCCCTACGATTTGGGTTTCAAGCTTCTCGAAC
mRNA sequenceShow/hide mRNA sequence
ATAAACGACGAGCTGCAGAATCCAAAGCTAGAATCTCTTGGTGGTTCGGAAACTGTCGACAGATCCGCCGTGCACGGCGTCGAAAACGAGCTCATGGTTCTGCAGAAAAT
GCTCGAGAAAACACACGGCGGCAACGGCTTCAAAGCCATCGGAATCTTCGGAGCCAAAGGATTGAAACCGATTTCCCAAGCTTTTCTCCAAAACCCAGAAGTGAAATCAC
AATTTATCCCTACGATTTGGGTTTCAAGCTTCTCGAAC
Protein sequenceShow/hide protein sequence
INDELQNPKLESLGGSETVDRSAVHGVENELMVLQKMLEKTHGGNGFKAIGIFGAKGLKPISQAFLQNPEVKSQFIPTIWVSSFSN