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MS016235 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016235
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold9_2:1333528..1333866
RNA-Seq ExpressionMS016235
SyntenyMS016235
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606831.1 hypothetical protein SDJN03_00173, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4384.68Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  RYPFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADLVGVLIASF LHALRFSIR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFM
        K+ASP+RDI M
Subjt:  KDASPSRDIFM
KAG7036537.1 hypothetical protein SDJN02_00156, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4384.82Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  RYPFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADLVGVLIASF LHALRFSIR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP+RDI MV
Subjt:  KDASPSRDIFMV
XP_022948457.1 uncharacterized protein LOC111452136 [Cucurbita moschata]1.3e-4384.82Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  RYPFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADLVGVLIASF LHALRFSIR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP+RDI MV
Subjt:  KDASPSRDIFMV
XP_022997696.1 uncharacterized protein LOC111492582 [Cucurbita maxima]3.3e-4282.14Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  R+PFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADL+GVLIASF LHALRF IR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP+RDI MV
Subjt:  KDASPSRDIFMV
XP_038890690.1 uncharacterized protein LOC120080188 [Benincasa hispida]3.9e-4383.04Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        D+DPWLAPDKLYH LLCFTLTI FA+LA   RYPFIRRHSILIGSV SLF GAAKEVADELGFFKSAGAS +DA+ADL+GVLIASFLLH LRFSIR  GD
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP RDI MV
Subjt:  KDASPSRDIFMV
TrEMBL top hitse value%identityAlignment
A0A0A0KYM1 Uncharacterized protein1.9e-4077.39Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR----
        D+DPWLAPDK YH LLCF+LTI FA+ A   RYPFIRRHSILIGSV SLF GAAKEVADELGFFKSAGAS +DAVAD +GVLIASFLLHALRFSIR    
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR----

Query:  -GDKDASPSRDIFMV
         G K+A P+RDI MV
Subjt:  -GDKDASPSRDIFMV
A0A1S3BXG6 uncharacterized protein LOC1034946503.0e-4179.65Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR---G
        D+DPWLAPDKLYH LLCF+LTI FA+ A   RYPFIRRHSILIGSV SL  GAAKEVADELGFFKSAGAS +DAVADL+GVL+ASFLLHALRFSIR   G
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR---G

Query:  DKDASPSRDIFMV
        DK+A P+RDI MV
Subjt:  DKDASPSRDIFMV
A0A5A7TRK6 Putative transmembrane protein3.0e-4179.65Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR---G
        D+DPWLAPDKLYH LLCF+LTI FA+ A   RYPFIRRHSILIGSV SL  GAAKEVADELGFFKSAGAS +DAVADL+GVL+ASFLLHALRFSIR   G
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR---G

Query:  DKDASPSRDIFMV
        DK+A P+RDI MV
Subjt:  DKDASPSRDIFMV
A0A6J1G9C8 uncharacterized protein LOC1114521366.5e-4484.82Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  RYPFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADLVGVLIASF LHALRFSIR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP+RDI MV
Subjt:  KDASPSRDIFMV
A0A6J1K872 uncharacterized protein LOC1114925821.6e-4282.14Show/hide
Query:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD
        DEDPW APDKLYH LLCFTLT+FFAALAT  R+PFIRRHSI+IGSV SLF GAAKEVADELGFFKSAGAS +DAVADL+GVLIASF LHALRF IR  G 
Subjt:  DEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIR--GD

Query:  KDASPSRDIFMV
        K+ASP+RDI MV
Subjt:  KDASPSRDIFMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15900.1 unknown protein1.7e-2562.07Show/hide
Query:  EDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLL
        EDPWLA DKLYHV+ CF++++ F+ LA+  RY F+RRHSI IGS  SL  GAAKE AD++G F SAGAS +DAVAD +GV+IA+ +L
Subjt:  EDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAATGGCCGACGAGGATCCATGGTTAGCTCCGGACAAGCTCTACCACGTTCTTCTCTGTTTCACTCTCACCATCTTCTTCGCTGCATTGGCCACTCAGATTCGGTATCC
ATTCATCCGTCGCCACTCCATTCTGATCGGATCCGTCGCTTCCCTTTTCGTCGGAGCCGCCAAGGAGGTCGCCGACGAGCTCGGCTTCTTCAAGTCCGCCGGAGCCTCTG
CCAAGGACGCAGTCGCGGATCTGGTTGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCCGTTTCTCGATCAGAGGCGACAAAGATGCCAGCCCTAGTCGGGACATT
TTTATGGTC
mRNA sequenceShow/hide mRNA sequence
CGAATGGCCGACGAGGATCCATGGTTAGCTCCGGACAAGCTCTACCACGTTCTTCTCTGTTTCACTCTCACCATCTTCTTCGCTGCATTGGCCACTCAGATTCGGTATCC
ATTCATCCGTCGCCACTCCATTCTGATCGGATCCGTCGCTTCCCTTTTCGTCGGAGCCGCCAAGGAGGTCGCCGACGAGCTCGGCTTCTTCAAGTCCGCCGGAGCCTCTG
CCAAGGACGCAGTCGCGGATCTGGTTGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCCCTCCGTTTCTCGATCAGAGGCGACAAAGATGCCAGCCCTAGTCGGGACATT
TTTATGGTC
Protein sequenceShow/hide protein sequence
RMADEDPWLAPDKLYHVLLCFTLTIFFAALATQIRYPFIRRHSILIGSVASLFVGAAKEVADELGFFKSAGASAKDAVADLVGVLIASFLLHALRFSIRGDKDASPSRDI
FMV