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MS016266 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016266
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold9_2:1535481..1537270
RNA-Seq ExpressionMS016266
SyntenyMS016266
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454177.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]7.0e-4272.03Show/hide
Query:  MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGI
        MAAT ATATG LK G PAPVK +  +  TNF RLTVRYPN  LNT  K  A+RAL     G+GG  SG+DD  AG FINQEDV+F LKL AGSIAGG GI
Subjt:  MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGI

Query:  KYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        KYGSIIFP+I KPN+VQALIMISTPVV+AIWLLIKQSREE QS
Subjt:  KYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

XP_022153461.1 uncharacterized protein LOC111020963 [Momordica charantia]3.0e-6999.29Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY
        MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNC LNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY
Subjt:  MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY

Query:  GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
Subjt:  GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

XP_022955512.1 uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata]6.3e-4373.24Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK
        MAATAA ATGA KIG+PAPVK EKK  TNFTRLTVRYPNC LNT PKV AIRAL      EG +S G DDTG    I+QEDVQF+LK+ AGSIA G GIK
Subjt:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK

Query:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        YGSIIFP++ KPN+VQALIM+STPVV+AIWLLI QSR++RQS
Subjt:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

XP_023528959.1 uncharacterized protein LOC111791721 [Cucurbita pepo subsp. pepo]1.6e-4171.83Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK
        MAATAA ATGALKIG+ +PVK EKK  TNFTRLTVRYPNC LNT PKV AIRAL      EG +S G DDTG    I+ EDVQF+LK+ AGSIA G GIK
Subjt:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK

Query:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        YGSIIFP++ KPN+VQALIM+STPVV+AIWLLI QSR++RQS
Subjt:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

XP_038902938.1 uncharacterized protein LOC120089511 [Benincasa hispida]1.7e-4877.7Show/hide
Query:  ATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKYGS
        A A T TGALKIGIPAP K EKK TNF RLTVRYPNC LNT  K  AIRAL     G+GGN SG+DDT AG FINQEDVQFLLKL AGSIAGG GIKYGS
Subjt:  ATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKYGS

Query:  IIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        IIFP++ KPN+VQALIMIS PVV+AIWLLI QSREERQS
Subjt:  IIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ3 Uncharacterized protein1.7e-4168.21Show/hide
Query:  MAATAATATGALKIGIPAP----------VKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAG
        MAAT ATATG LKIG+PAP           K  +  TNF  LT+RYPN  LNT  K  A+RAL     G+GGN SG DD  AG FINQEDV+FLLKL AG
Subjt:  MAATAATATGALKIGIPAP----------VKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAG

Query:  SIAGGAGIKYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        SIAGG GIKYGSIIFP+I KPN+VQALIMISTPVV+AIWLLIKQSREE QS
Subjt:  SIAGGAGIKYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

A0A1S4E0N1 uncharacterized protein LOC1034946603.4e-4272.03Show/hide
Query:  MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGI
        MAAT ATATG LK G PAPVK +  +  TNF RLTVRYPN  LNT  K  A+RAL     G+GG  SG+DD  AG FINQEDV+F LKL AGSIAGG GI
Subjt:  MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGI

Query:  KYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        KYGSIIFP+I KPN+VQALIMISTPVV+AIWLLIKQSREE QS
Subjt:  KYGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

A0A6J1DKQ3 uncharacterized protein LOC1110209631.5e-6999.29Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY
        MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNC LNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY
Subjt:  MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKY

Query:  GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
Subjt:  GSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

A0A6J1GTV4 uncharacterized protein LOC111457518 isoform X13.1e-4373.24Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK
        MAATAA ATGA KIG+PAPVK EKK  TNFTRLTVRYPNC LNT PKV AIRAL      EG +S G DDTG    I+QEDVQF+LK+ AGSIA G GIK
Subjt:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK

Query:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        YGSIIFP++ KPN+VQALIM+STPVV+AIWLLI QSR++RQS
Subjt:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

A0A6J1GU58 uncharacterized protein LOC111457518 isoform X22.2e-4171.13Show/hide
Query:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK
        MAATAA ATGA KIG+PAPVK EKK  TNFTRLTVRYPNC LNT PKV AIRAL      EG +S G DDTG       +DVQF+LK+ AGSIA G GIK
Subjt:  MAATAATATGALKIGIPAPVKPEKK-ATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIK

Query:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS
        YGSIIFP++ KPN+VQALIM+STPVV+AIWLLI QSR++RQS
Subjt:  YGSIIFPDIAKPNLVQALIMISTPVVLAIWLLIKQSREERQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15900.1 unknown protein8.9e-1155.56Show/hide
Query:  QEDVQFLLKLVAGSIAGGAGIKYGSIIFPDIAKPNLVQALIMISTPVVLAIWLL
        QED+ +LLK+  GS+AG A IKYGS++FP I +PNL  AL +I  PVV+++ LL
Subjt:  QEDVQFLLKLVAGSIAGGAGIKYGSIIFPDIAKPNLVQALIMISTPVVLAIWLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGACGGCGGCGACGGCGACGGGAGCCTTGAAGATCGGCATTCCGGCTCCGGTCAAACCAGAAAAGAAGGCGACGAACTTCACCAGACTAACAGTTCGCTATCC
CAATTGCATTCTCAATACATGGCCGAAAGTTTCTGCCATTCGAGCACTCGATCCCGAAACCAGAGGAGAAGGAGGAAATTCGAGCGGCAGCGACGACACCGGCGCCGGCG
ATTTCATCAATCAGGAGGATGTGCAATTTTTGTTGAAACTGGTGGCTGGTTCCATAGCAGGGGGAGCTGGAATCAAGTATGGAAGCATAATCTTTCCAGATATAGCTAAA
CCCAACTTGGTACAAGCTCTTATTATGATATCAACTCCTGTTGTTCTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGC
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCGACGGCGGCGACGGCGACGGGAGCCTTGAAGATCGGCATTCCGGCTCCGGTCAAACCAGAAAAGAAGGCGACGAACTTCACCAGACTAACAGTTCGCTATCC
CAATTGCATTCTCAATACATGGCCGAAAGTTTCTGCCATTCGAGCACTCGATCCCGAAACCAGAGGAGAAGGAGGAAATTCGAGCGGCAGCGACGACACCGGCGCCGGCG
ATTTCATCAATCAGGAGGATGTGCAATTTTTGTTGAAACTGGTGGCTGGTTCCATAGCAGGGGGAGCTGGAATCAAGTATGGAAGCATAATCTTTCCAGATATAGCTAAA
CCCAACTTGGTACAAGCTCTTATTATGATATCAACTCCTGTTGTTCTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGC
Protein sequenceShow/hide protein sequence
MAATAATATGALKIGIPAPVKPEKKATNFTRLTVRYPNCILNTWPKVSAIRALDPETRGEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPDIAK
PNLVQALIMISTPVVLAIWLLIKQSREERQS