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MS016277 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016277
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTrehalase 1
Genome locationscaffold1407:11188..11427
RNA-Seq ExpressionMS016277
SyntenyMS016277
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647837.1 hypothetical protein Csa_000196 [Cucumis sativus]3.3e-2076.54Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDL-DDDDDDDHLL-----LSDHFQCPDQHDGF
        ME+ +NNA  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCV++ATN+L DDDDDDDHLL     LSD    PDQHDG+
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDL-DDDDDDDHLL-----LSDHFQCPDQHDGF

KAG6605572.1 hypothetical protein SDJN03_02889, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2275.58Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLLL------SDHFQCPDQHDGFVNLPV
        ME+ NNN   LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATND DDDDDDD+  L      SD F   DQ DGFV+LPV
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLLL------SDHFQCPDQHDGFVNLPV

ONI07532.1 hypothetical protein PRUPE_5G126200 [Prunus persica]5.6e-1270.69Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD
        ME+GNN     SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DD+D+D+
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD

XP_008437391.1 PREDICTED: uncharacterized protein LOC103482822 [Cucumis melo]2.9e-2480Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV
        ME+ +NNA  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDDDDDDD LL     LSD    PDQHDGFV+LPV
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV

XP_011465366.1 PREDICTED: uncharacterized protein LOC105351736 [Fragaria vesca subsp. vesca]1.9e-1259.74Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLLLSDHFQCPDQHDGFVN
        MEDGN N  T +I+SRE +DQVA WV+AT+SSAFFSSLERFSCVN+AT D DDD+ + H L   +   PDQ     N
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLLLSDHFQCPDQHDGFVN

TrEMBL top hitse value%identityAlignment
A0A0A0KK32 Uncharacterized protein2.0e-2377.91Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDL-DDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV
        ME+ +NNA  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCV++ATN+L DDDDDDDHLL     LSD    PDQHDGFV+LPV
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDL-DDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV

A0A1S3AUH1 uncharacterized protein LOC1034828221.4e-2480Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV
        ME+ +NNA  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDDDDDDD LL     LSD    PDQHDGFV+LPV
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV

A0A5A7THD9 Trehalase 11.4e-2480Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV
        ME+ +NNA  LSILSREKLDQVAAWVAATMSSAFFSSLERFSCVN+ATNDLDDDDDDD LL     LSD    PDQHDGFV+LPV
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLL-----LSDHFQCPDQHDGFVNLPV

A0A6J5UUI8 Uncharacterized protein2.7e-1270.69Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD
        ME+GNN     SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DD+D+D+
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD

M5WNZ8 Uncharacterized protein2.7e-1270.69Show/hide
Query:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD
        ME+GNN     SI+SREKLDQVA+WV+AT+S+AFFSSLERFSCVN+AT D DD+D+D+
Subjt:  MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein1.2e-0955.56Show/hide
Query:  NNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDH
        + A  LS  S EKLDQ A+WV+ T+ SAFF+SLER SCVN++T+D DD+ ++ H
Subjt:  NNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDH

AT4G24026.1 unknown protein2.8e-0961.36Show/hide
Query:  SREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD
        S EK+D  A+W++AT+ SAFF+SLER +CVN++T+  DDDDDDD
Subjt:  SREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGGCAACAACAATGCCCTGACCCTGAGTATCCTTTCACGGGAGAAGCTGGACCAGGTCGCGGCATGGGTGGCCGCCACCATGTCCTCCGCCTTCTTCTCCTC
CTTGGAAAGATTCTCCTGCGTCAATATCGCCACCAACGATCTTGATGACGATGACGACGACGACCACCTTCTCTTGTCCGATCACTTCCAATGTCCCGACCAACACGACG
GGTTTGTCAATCTTCCTGTC
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGGCAACAACAATGCCCTGACCCTGAGTATCCTTTCACGGGAGAAGCTGGACCAGGTCGCGGCATGGGTGGCCGCCACCATGTCCTCCGCCTTCTTCTCCTC
CTTGGAAAGATTCTCCTGCGTCAATATCGCCACCAACGATCTTGATGACGATGACGACGACGACCACCTTCTCTTGTCCGATCACTTCCAATGTCCCGACCAACACGACG
GGTTTGTCAATCTTCCTGTC
Protein sequenceShow/hide protein sequence
MEDGNNNALTLSILSREKLDQVAAWVAATMSSAFFSSLERFSCVNIATNDLDDDDDDDHLLLSDHFQCPDQHDGFVNLPV