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MS016284 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016284
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1407:92063..92392
RNA-Seq ExpressionMS016284
SyntenyMS016284
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]7.5e-0755.68Show/hide
Query:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNL
        MA  QC+KPAD  H Q+ QKHDQ    HCF GHVSDKIKGVF KGH HH QA  A  A HHS N +++   S S K+KE    K+G +
Subjt:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNL

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]2.9e-1961.86Show/hide
Query:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHS
        MA  QC+KPAD  H Q+ QKHDQ    HCF GHVSDKIKGVF KGH HH QA  A  A HHS N +++   S S K+KE    K+G LLHKIK+AFSDHS
Subjt:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHS

Query:  SDSSDSDNEGHKAHRKSK
        SDSSDS+NE HK H   K
Subjt:  SDSSDSDNEGHKAHRKSK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]1.1e-53100Show/hide
Query:  MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN
        MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN
Subjt:  MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN

Query:  EGHKAHRKSK
        EGHKAHRKSK
Subjt:  EGHKAHRKSK

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]6.7e-2467.83Show/hide
Query:  MASLQCSKPADQQHSQNQKHDQ--GHCF-GHVSDKIKGVFKGHGHHGQAP--GAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDS
        MASLQC+KPAD  H Q QKHDQ   HCF GHVSDKIKGVFKGH HHGQAP   A  HHS N  ++   + S K+KE HKNK+G LLHKIKDAFSDHSSDS
Subjt:  MASLQCSKPADQQHSQNQKHDQ--GHCF-GHVSDKIKGVFKGHGHHGQAP--GAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDS

Query:  SDSDNEGHKAHRKSK
        SDS+NE  K H   K
Subjt:  SDSDNEGHKAHRKSK

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828151.4e-1961.86Show/hide
Query:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHS
        MA  QC+KPAD  H Q+ QKHDQ    HCF GHVSDKIKGVF KGH HH QA  A  A HHS N +++   S S K+KE    K+G LLHKIK+AFSDHS
Subjt:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHS

Query:  SDSSDSDNEGHKAHRKSK
        SDSSDS+NE HK H   K
Subjt:  SDSSDSDNEGHKAHRKSK

A0A5A7TMV4 Uncharacterized protein3.6e-0755.68Show/hide
Query:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNL
        MA  QC+KPAD  H Q+ QKHDQ    HCF GHVSDKIKGVF KGH HH QA  A  A HHS N +++   S S K+KE    K+G +
Subjt:  MASLQCSKPADQQHSQN-QKHDQ---GHCF-GHVSDKIKGVF-KGHGHHGQAPGA--APHHSTNVNANANASVSHKEKEQHKNKDGNL

A0A6J1CWW2 uncharacterized protein LOC1110153155.1e-54100Show/hide
Query:  MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN
        MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN
Subjt:  MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDN

Query:  EGHKAHRKSK
        EGHKAHRKSK
Subjt:  EGHKAHRKSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCACTACAATGCAGCAAACCAGCTGATCAGCAACACAGCCAAAACCAGAAGCACGACCAAGGTCACTGCTTCGGCCACGTGTCCGATAAGATCAAAGGCGTCTT
CAAAGGCCACGGCCATCACGGCCAGGCTCCGGGGGCAGCACCCCACCACTCGACCAATGTCAATGCCAATGCTAATGCTAGCGTCAGTCACAAGGAGAAGGAACAACATA
AAAACAAAGATGGGAATTTGTTGCACAAGATCAAGGATGCCTTTTCCGACCACAGCAGCGACAGCAGTGACAGTGACAATGAGGGTCACAAAGCCCACCGCAAAAGCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCACTACAATGCAGCAAACCAGCTGATCAGCAACACAGCCAAAACCAGAAGCACGACCAAGGTCACTGCTTCGGCCACGTGTCCGATAAGATCAAAGGCGTCTT
CAAAGGCCACGGCCATCACGGCCAGGCTCCGGGGGCAGCACCCCACCACTCGACCAATGTCAATGCCAATGCTAATGCTAGCGTCAGTCACAAGGAGAAGGAACAACATA
AAAACAAAGATGGGAATTTGTTGCACAAGATCAAGGATGCCTTTTCCGACCACAGCAGCGACAGCAGTGACAGTGACAATGAGGGTCACAAAGCCCACCGCAAAAGCAAG
Protein sequenceShow/hide protein sequence
MASLQCSKPADQQHSQNQKHDQGHCFGHVSDKIKGVFKGHGHHGQAPGAAPHHSTNVNANANASVSHKEKEQHKNKDGNLLHKIKDAFSDHSSDSSDSDNEGHKAHRKSK