; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016329 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016329
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin-like protein
Genome locationscaffold1038:56595..56741
RNA-Seq ExpressionMS016329
SyntenyMS016329
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7997632.1 hypothetical protein FH972_002248 [Carpinus fangiana]1.6e-1467.35Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+S+SH+FHGPC+ DHNCA  CRNE ++GG C+G RRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

XP_022932005.1 defensin-like protein 1 [Cucurbita moschata]3.0e-1677.55Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSHRFHG CI DHNCAE CRNE +TGGHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

XP_022973835.1 defensin-like protein 1 [Cucurbita maxima]1.1e-1575.51Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSHRFHG CI DHNCAE CRNE + GGHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

XP_023522687.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]6.7e-1675.51Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+S+SHRFHG CI DHNCAE CRNE +TGGHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

XP_038902705.1 defensin-like protein 1 [Benincasa hispida]6.7e-1675.51Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGRTC+S+SHRFHGPCI  HNCAE CRNE +T GHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

TrEMBL top hitse value%identityAlignment
A0A061EJM1 Scorpion toxin-like knottin superfamily protein1.0e-1469.39Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSH+F GPC+ DHNCA  CRNE ++GG C GFR RCFCTK C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

A0A5N6QE93 Knot1 domain-containing protein8.0e-1567.35Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+S+SH+FHGPC+ DHNCA  CRNE ++GG C+G RRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

A0A6J1AXB1 defensin-like protein 11.0e-1469.39Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSH+F  PC+ DHNCA  CRNE ++GG C GFRRRCFCTK C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

A0A6J1F103 defensin-like protein 11.5e-1677.55Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSHRFHG CI DHNCAE CRNE +TGGHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

A0A6J1ICD1 defensin-like protein 15.5e-1675.51Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGR C+SKSHRFHG CI DHNCAE CRNE + GGHC GFR RCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

SwissProt top hitse value%identityAlignment
P20346 Defensin-like protein P3223.8e-1463.27Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E R C+S SHRF GPC  D NCA  C  E ++GG+C GFRRRCFCTK C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

Q39182 Defensin-like protein 22.9e-1461.22Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC+S+SHRF G C++  NCA  C NE + GG+C GFRRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

Q40901 Defensin-like protein2.9e-1459.18Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC+S+SHRFHG C+ + NCA  C+ E + GG+C  FRRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

Q9FFP8 Defensin-like protein 62.2e-1463.27Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGRTCQSKSH F   C ++HNCA  CRNE ++GG C GF RRC+CT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

Q9ZUL7 Defensin-like protein 15.3e-1665.31Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC+SKSHRF GPC++ HNCA  C NE + GG C GFRRRC+CT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 664.3e-1353.06Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC++ S+ F+GPC++  NCA  C NE ++ G C GFRRRC CT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

AT2G02100.1 low-molecular-weight cysteine-rich 692.1e-1561.22Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC+S+SHRF G C++  NCA  C NE + GG+C GFRRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein5.1e-1459.18Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC S+S RF G C++D NC   C NE + GG C GFRRRCFCT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

AT2G02130.1 low-molecular-weight cysteine-rich 683.8e-1765.31Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        E RTC+SKSHRF GPC++ HNCA  C NE + GG C GFRRRC+CT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein1.6e-1563.27Show/hide
Query:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC
        EGRTCQSKSH F   C ++HNCA  CRNE ++GG C GF RRC+CT+ C
Subjt:  EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGGGGAGGACATGCCAGTCGAAGAGCCATCGGTTCCATGGACCATGCATTAATGACCACAATTGTGCGGAGACTTGTCGAAACGAAGCCTATACCGGTGGCCACTGCGA
AGGATTTCGCCGTCGCTGTTTCTGCACTAAAGCCTGT
mRNA sequenceShow/hide mRNA sequence
GAGGGGAGGACATGCCAGTCGAAGAGCCATCGGTTCCATGGACCATGCATTAATGACCACAATTGTGCGGAGACTTGTCGAAACGAAGCCTATACCGGTGGCCACTGCGA
AGGATTTCGCCGTCGCTGTTTCTGCACTAAAGCCTGT
Protein sequenceShow/hide protein sequence
EGRTCQSKSHRFHGPCINDHNCAETCRNEAYTGGHCEGFRRRCFCTKAC