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MS016330 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016330
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionKnot1 domain-containing protein
Genome locationscaffold1038:62076..62291
RNA-Seq ExpressionMS016330
SyntenyMS016330
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012487035.1 PREDICTED: defensin-like protein 1 [Gossypium raimondii]5.2e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

XP_017609817.1 PREDICTED: defensin-like protein 1 [Gossypium arboreum]4.0e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

XP_024447769.1 defensin-like protein 1 [Populus trichocarpa]6.8e-1761.97Show/hide
Query:  RSFIVYF--YVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        RSF ++F   + L ++E+  P E R CQSQSH F GPCA  HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  RSFIVYF--YVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

XP_034918627.1 defensin-like protein 1 isoform X1 [Populus alba]4.0e-1763.38Show/hide
Query:  RSFIVYF--YVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        RSF ++F   V L ++E+  P E R CQSQSH F GPCA  HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  RSFIVYF--YVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

XP_038902705.1 defensin-like protein 1 [Benincasa hispida]6.1e-1865.15Show/hide
Query:  IVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        ++   V L  +E  R CEGRTC+SQSHRFHGPC   HNCAEACR+EG+T G CVGFR RCFCT+ C
Subjt:  IVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

TrEMBL top hitse value%identityAlignment
A0A0B0NRD2 Defensin-like protein 11.9e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

A0A0D2RUF7 Knot1 domain-containing protein2.5e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

A0A1U8HWV6 defensin-like protein 12.5e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

A0A5D2JLG0 Knot1 domain-containing protein2.5e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

A0A5J5Q853 Knot1 domain-containing protein2.5e-1756.94Show/hide
Query:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        KR+  F     + L ++   +P E R CQSQSH+FHG C ++HNCA  CR+EG++GGRC GFRRRCFCTKLC
Subjt:  KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

SwissProt top hitse value%identityAlignment
P86518 Defensin Ec-AMP-D18.1e-1363.83Show/hide
Query:  RTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        R CQSQSHR+ G C +  NCA  C+ EG++GG+CVGFR RCFCTK C
Subjt:  RTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

Q39182 Defensin-like protein 23.3e-1465.31Show/hide
Query:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        E RTC+SQSHRF G C +A NCA  C +EG+ GG C GFRRRCFCT+ C
Subjt:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

Q40901 Defensin-like protein2.5e-1452.7Show/hide
Query:  RSFIVYFYVG---LNTE--EMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        R F  +F +    L+TE   MT   E RTC+SQSHRFHG C    NCA  C+ EG+ GG C  FRRRCFCT+ C
Subjt:  RSFIVYFYVG---LNTE--EMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

Q9FFP8 Defensin-like protein 63.3e-1465.31Show/hide
Query:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        EGRTCQS+SH F   C + HNCA  CR+EG++GGRC GF RRC+CT+LC
Subjt:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

Q9ZUL7 Defensin-like protein 11.7e-1550.75Show/hide
Query:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        F+V+   G+    +    E RTC+S+SHRF GPC + HNCA  C +EG+ GG+C GFRRRC+CT+ C
Subjt:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 667.0e-1253.06Show/hide
Query:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        E RTC++ S+ F+GPC ++ NCA  C +EG++ G C GFRRRC CT+ C
Subjt:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

AT2G02100.1 low-molecular-weight cysteine-rich 692.3e-1565.31Show/hide
Query:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        E RTC+SQSHRF G C +A NCA  C +EG+ GG C GFRRRCFCT+ C
Subjt:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein2.8e-1349.25Show/hide
Query:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        F+V  +V      +T   E RTC SQS RF G C +  NC   C +EG+ GG C GFRRRCFCT+ C
Subjt:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

AT2G02130.1 low-molecular-weight cysteine-rich 681.2e-1650.75Show/hide
Query:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        F+V+   G+    +    E RTC+S+SHRF GPC + HNCA  C +EG+ GG+C GFRRRC+CT+ C
Subjt:  FIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein2.3e-1565.31Show/hide
Query:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC
        EGRTCQS+SH F   C + HNCA  CR+EG++GGRC GF RRC+CT+LC
Subjt:  EGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAACGGAATCGATCATTTATCGTGTATTTTTATGTTGGTCTAAATACAGAAGAAATGACAAGGCCATGCGAGGGGAGAACATGCCAGTCACAAAGCCATCGGTTCCATGG
GCCATGCGCAAATGCCCACAACTGCGCTGAGGCTTGCCGCCACGAAGGCTATACTGGTGGTCGCTGCGTCGGATTTCGCCGTCGTTGCTTTTGCACTAAGCTCTGT
mRNA sequenceShow/hide mRNA sequence
AAACGGAATCGATCATTTATCGTGTATTTTTATGTTGGTCTAAATACAGAAGAAATGACAAGGCCATGCGAGGGGAGAACATGCCAGTCACAAAGCCATCGGTTCCATGG
GCCATGCGCAAATGCCCACAACTGCGCTGAGGCTTGCCGCCACGAAGGCTATACTGGTGGTCGCTGCGTCGGATTTCGCCGTCGTTGCTTTTGCACTAAGCTCTGT
Protein sequenceShow/hide protein sequence
KRNRSFIVYFYVGLNTEEMTRPCEGRTCQSQSHRFHGPCANAHNCAEACRHEGYTGGRCVGFRRRCFCTKLC