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MS016332 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016332
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondefensin-like protein 1
Genome locationscaffold1038:77070..77300
RNA-Seq ExpressionMS016332
SyntenyMS016332
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50468.1 defensin-like protein 2 [Citrullus lanatus]5.7e-2284.75Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +EEMMGGG AE RVCKSQSH FHG C  DHNCA VCRTEGFSGGDC GFRRRCFCTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

KAA0063092.1 defensin-like protein 1 [Cucumis melo var. makuwa]1.4e-2077.42Show/hide
Query:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +C  EEMMGGG AEAR+C+SQSHHFHG C  DHNCA VCRTEGFSGG+C GFRRRCFCT  C
Subjt:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

KAG6571314.1 Defensin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.1e-2081.36Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++E+M G  AEARVCKSQSHHFHG CFS+HNCA VCRTEGFSGGDC GFRRRCFCTR C
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

XP_022158825.1 defensin-like protein 1 [Momordica charantia]1.2e-2796.61Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++EMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

XP_022931974.1 defensin-like protein 1 [Cucurbita moschata]3.2e-2081.36Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++E+M G  AEARVCKSQSHHFHG+CFS+HNCA VCRTEGFSGGDC GFRRRCFCTR C
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

TrEMBL top hitse value%identityAlignment
A0A1S4E313 defensin-like protein 12.6e-2079.66Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +EEMMGGG AEAR+C+SQSHHFHG C  DHNCA VCRTEGFSGG+C GFRRRCFCT  C
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

A0A5D3BQK8 Defensin-like protein 16.9e-2177.42Show/hide
Query:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +C  EEMMGGG AEAR+C+SQSHHFHG C  DHNCA VCRTEGFSGG+C GFRRRCFCT  C
Subjt:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

A0A6J1DWX4 defensin-like protein 15.8e-2896.61Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++EMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

A0A6J1EVR5 defensin-like protein 11.5e-2081.36Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++E+M G  AEARVCKSQSHHFHG+CFS+HNCA VCRTEGFSGGDC GFRRRCFCTR C
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

W5RNL9 Defensin-like protein 22.8e-2284.75Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +EEMMGGG AE RVCKSQSH FHG C  DHNCA VCRTEGFSGGDC GFRRRCFCTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

SwissProt top hitse value%identityAlignment
A3FPF2 Defensin-like protein2.0e-1766.13Show/hide
Query:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        L VT   MG  VAEAR C+SQSH F GAC SD NCA VC+TEGF  GDC G RRRCFC + C
Subjt:  LCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

O65740 Defensin J1-25.8e-1762.12Show/hide
Query:  ACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        A  FL +      G VAEAR C+SQSH F G CFS  NC  VC TEGF+GG C GFRRRCFCTR C
Subjt:  ACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

P82659 Defensin SD24.9e-1661.9Show/hide
Query:  LCVTEEMMGGG-VAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +C+    MGG  V EAR C+SQSH F G C SD NCA VC +E FSGG C GFRRRCFCT  C
Subjt:  LCVTEEMMGGG-VAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

Q40901 Defensin-like protein1.7e-1660.94Show/hide
Query:  AFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        A L ++ EM     AEAR C+SQSH FHG C  + NCA VC+TEGF GG+C  FRRRCFCTR C
Subjt:  AFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

Q9FFP8 Defensin-like protein 62.2e-1662.71Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++E++GG   E R C+S+SHHF   C S+HNCA VCR EGFSGG C+GF RRC+CTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

Arabidopsis top hitse value%identityAlignment
AT1G61070.1 low-molecular-weight cysteine-rich 662.1e-1458.93Show/hide
Query:  MMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        +MG    EAR C++ S+ F+G C S  NCA VC  EGFS GDC GFRRRC CTR C
Subjt:  MMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

AT2G02100.1 low-molecular-weight cysteine-rich 692.9e-1654.29Show/hide
Query:  VCACACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        + A    F+      MG    EAR C+SQSH F G C S  NCA VC  EGF GG+C GFRRRCFCTR C
Subjt:  VCACACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

AT2G02120.1 Scorpion toxin-like knottin superfamily protein5.0e-1665.45Show/hide
Query:  MGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        MG    EAR C SQS  F G C SD NC  VC  EGF GGDC GFRRRCFCTR C
Subjt:  MGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

AT2G02130.1 low-molecular-weight cysteine-rich 681.7e-1652.86Show/hide
Query:  VCACACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        + A    F+      MG    EAR C+S+SH F G C S HNCA VC  EGF GG C GFRRRC+CTR C
Subjt:  VCACACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC

AT5G63660.1 Scorpion toxin-like knottin superfamily protein1.6e-1762.71Show/hide
Query:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC
        ++E++GG   E R C+S+SHHF   C S+HNCA VCR EGFSGG C+GF RRC+CTRLC
Subjt:  TEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGTTTGACGATTATGATGTGTGTGCGTGTGCGTGCGCGTTTTTGTGCGTAACAGAAGAGATGATGGGAGGCGGTGTTGCTGAGGCGAGGGTGTGCAAGTCGCAGAG
CCACCACTTCCACGGGGCGTGCTTCAGCGACCACAACTGCGCCCAGGTGTGCCGCACCGAGGGGTTCTCGGGCGGCGACTGCAACGGGTTCCGCCGCCGCTGCTTCTGCA
CTAGACTGTGT
mRNA sequenceShow/hide mRNA sequence
TTGTTGTTTGACGATTATGATGTGTGTGCGTGTGCGTGCGCGTTTTTGTGCGTAACAGAAGAGATGATGGGAGGCGGTGTTGCTGAGGCGAGGGTGTGCAAGTCGCAGAG
CCACCACTTCCACGGGGCGTGCTTCAGCGACCACAACTGCGCCCAGGTGTGCCGCACCGAGGGGTTCTCGGGCGGCGACTGCAACGGGTTCCGCCGCCGCTGCTTCTGCA
CTAGACTGTGT
Protein sequenceShow/hide protein sequence
LLFDDYDVCACACAFLCVTEEMMGGGVAEARVCKSQSHHFHGACFSDHNCAQVCRTEGFSGGDCNGFRRRCFCTRLC