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MS016372 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016372
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold227:42230..42514
RNA-Seq ExpressionMS016372
SyntenyMS016372
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577526.1 hypothetical protein SDJN03_25100, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2582.35Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHH
        MEI  K+ KFRFH +A LILSL LFSL+LLAP+FLSLLA+FWPLLLSTALFLLAVLLF NTSLP PDKA EGLLNYVAG HPDHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHH

KAG6596766.1 hypothetical protein SDJN03_09946, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2473.68Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHHHHFDAAFKSD
        MEI  K+ +FRFHFLA L L L LFSL+LLAPR LSL+AYFWPLLLSTALFLLAVLLFAN SLPPPDK GEGLLNYVAG     H   DA+ K+D
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHHHHFDAAFKSD

KAG7028299.1 hypothetical protein SDJN02_09480, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-2574.74Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHHHHFDAAFKSD
        MEI  K+ KFRFHFLA L L L LFSL+LLAPR LSL+AYFWPLLLSTALFLLAVLLFAN SLPPPDK GEGLLNYVAG     H   DA+ K+D
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHHHHFDAAFKSD

KGN56016.1 hypothetical protein Csa_010324 [Cucumis sativus]3.4e-2482.72Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHH
        MEI  K++KFRFH L  LILSL LFSL LLAP FLSLLAYFWPL LSTALFLLAVLLFANTSLP PDKA EGLL+YVAGHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHH

PON94035.1 hypothetical protein TorRG33x02_100740 [Trema orientale]2.5e-1965.91Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PDKAGEGLLNYVAGHHPDHHHH
        MEI  KL++F+FH L  LIL + + +L+L+APRF+++LAYFWPLLLSTALFL AVL+F  TS PP  DKAGEGLL+YVAG   DHHHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PDKAGEGLLNYVAGHHPDHHHH

TrEMBL top hitse value%identityAlignment
A0A0A0L7E9 Uncharacterized protein1.6e-2482.72Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHH
        MEI  K++KFRFH L  LILSL LFSL LLAP FLSLLAYFWPL LSTALFLLAVLLFANTSLP PDKA EGLL+YVAGHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHH

A0A2P5F8A8 Uncharacterized protein1.2e-1965.91Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PDKAGEGLLNYVAGHHPDHHHH
        MEI  KL++F+FH L  LIL + + +L+L+APRF+++LAYFWPLLLSTALFL AVL+F  TS PP  DKAGEGLL+YVAG   DHHHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP-PDKAGEGLLNYVAGHHPDHHHH

A0A2P6QFZ6 Uncharacterized protein6.7e-1866.29Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLP-----PPDKAGEGLLNYVAGHHPDH
        MEI  KLLKF++HFL  LI  L L+SL L APRFL++LAYFWPL LSTALFL AV++F  TSLP       DKAGEGLL+YVAG  PDH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLP-----PPDKAGEGLLNYVAGHHPDH

A0A7J6EV09 Uncharacterized protein1.8e-1864.04Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP--PDKAGEGLLNYVAGHHPDHHHH
        ++I  KL++F+FH L  LIL   + +LIL+AP+FL++LAYFWPLLLSTALFL+AVL+FA TSLPP   DK GEGLL+YVAG    HHHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPP--PDKAGEGLLNYVAGHHPDHHHH

A0A7J6H819 Uncharacterized protein1.1e-1762.92Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPD--KAGEGLLNYVAGHHPDHHHH
        ++I  KL++F+FH L  LIL   + +LIL+AP+FL++LAYFWPLLLSTALFL+AVL+FA TSLPP    K GEGLL+YVAG    HHHH
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPD--KAGEGLLNYVAGHHPDHHHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein2.3e-1047.92Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTS-LP------PPDKAG-----EGLLNY-VAGHHPD
        ME   KLLKF+   +   +LSL   +L+  +P FL++L+YFWPL LSTALFL AV  FA TS LP      P + AG     EG+L+Y V G H D
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTS-LP------PPDKAG-----EGLLNY-VAGHHPD

AT4G16400.1 unknown protein3.2e-1244.71Show/hide
Query:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHH
        MEI  KL+++RFHF+  +++S+ + SL+  APR L++LAYFWPL  STA FL   + F        +  GE L++YVAG   D H
Subjt:  MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCGCCGGAAAATTGCTCAAGTTCAGATTCCATTTCCTCGCCGGCCTGATCCTCTCTCTGGCGCTCTTCTCCCTCATCCTCCTCGCTCCGAGATTCCTCTCCCT
CCTCGCCTATTTCTGGCCCCTCCTCCTCTCCACCGCCCTCTTCCTCCTCGCCGTCCTCCTCTTCGCCAACACCTCCCTCCCGCCGCCCGACAAAGCCGGCGAGGGCCTCC
TCAACTACGTCGCAGGCCACCACCCGGACCACCACCACCACTTCGACGCCGCCTTCAAGTCCGAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCGCCGGAAAATTGCTCAAGTTCAGATTCCATTTCCTCGCCGGCCTGATCCTCTCTCTGGCGCTCTTCTCCCTCATCCTCCTCGCTCCGAGATTCCTCTCCCT
CCTCGCCTATTTCTGGCCCCTCCTCCTCTCCACCGCCCTCTTCCTCCTCGCCGTCCTCCTCTTCGCCAACACCTCCCTCCCGCCGCCCGACAAAGCCGGCGAGGGCCTCC
TCAACTACGTCGCAGGCCACCACCCGGACCACCACCACCACTTCGACGCCGCCTTCAAGTCCGAT
Protein sequenceShow/hide protein sequence
MEIAGKLLKFRFHFLAGLILSLALFSLILLAPRFLSLLAYFWPLLLSTALFLLAVLLFANTSLPPPDKAGEGLLNYVAGHHPDHHHHFDAAFKSD