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MS016387 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016387
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionARM repeat superfamily protein
Genome locationscaffold1303:3158..10439
RNA-Seq ExpressionMS016387
SyntenyMS016387
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000225 - Armadillo
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146451.1 uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus]1.1e-7292.31Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGDNL+QQSV+LL+VKDPLFKRMGASRLARFSIDDE+RMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEA GALHKAGAILVIKS P+S ED KVNEYKSNLMKRF DLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

XP_011655026.1 uncharacterized protein LOC101212969 isoform X2 [Cucumis sativus]1.1e-7292.31Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGDNL+QQSV+LL+VKDPLFKRMGASRLARFSIDDE+RMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEA GALHKAGAILVIKS P+S ED KVNEYKSNLMKRF DLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

XP_022146798.1 uncharacterized protein LOC111015917 [Momordica charantia]7.7e-7494.23Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDD+RRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAV ALHKAGAILVIKS P+SVED K+NE+KSNL+KRFEDLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

XP_022150134.1 uncharacterized protein LOC111018388 [Momordica charantia]9.7e-7798.08Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGD+LMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAVGALHKAGAILVIKSAPNSVED KVNEYKSNLMKRFEDLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

XP_038891777.1 uncharacterized protein LOC120081166 isoform X1 [Benincasa hispida]5.0e-7392.95Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATF+GYQIFPYMGDNL+QQSV+LLQVKDPLFKRMGASRLARFSIDDERRMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAVGALHKAGAILVIKS P+S ED KVNEYKSNLMKRF DL YDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

TrEMBL top hitse value%identityAlignment
A0A0A0KM85 Uncharacterized protein5.4e-7392.31Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGDNL+QQSV+LL+VKDPLFKRMGASRLARFSIDDE+RMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEA GALHKAGAILVIKS P+S ED KVNEYKSNLMKRF DLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

A0A6J1CZI6 uncharacterized protein LOC1110159173.7e-7494.23Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDD+RRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAV ALHKAGAILVIKS P+SVED K+NE+KSNL+KRFEDLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

A0A6J1D932 uncharacterized protein LOC1110183884.7e-7798.08Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGYQIFPYMGD+LMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAVGALHKAGAILVIKSAPNSVED KVNEYKSNLMKRFEDLRYDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

A0A6J1FNN3 uncharacterized protein LOC111447100 isoform X12.7e-7291.67Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGY IFPYMGDNL+QQSV+LLQVKDPLFKRMGASRLARFSIDDE+RMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAVGALHKAGAILVIKS P+S ED +VNEYKSNLMKRF DL YDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

A0A6J1FTA5 uncharacterized protein LOC111447100 isoform X22.7e-7291.67Show/hide
Query:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK
        EIE EAERKVGWLLKLIFAGTATFLGY IFPYMGDNL+QQSV+LLQVKDPLFKRMGASRLARFSIDDE+RMKIVE+GGAQELLNMLGAAKDDRTRKEALK
Subjt:  EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALK

Query:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        ALHAISHSDEAVGALHKAGAILVIKS P+S ED +VNEYKSNLMKRF DL YDVSS
Subjt:  ALHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G56210.1 ARM repeat superfamily protein2.2e-5565.81Show/hide
Query:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA
        +E EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS++LL VKDPLFKRMGASRL+RF+IDDERRMK+VEMGGAQELL+MLG+AKDD+TRKEALKA
Subjt:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA

Query:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        L A+S S EA   L   GA+ ++KS PNS+ED+ ++ YKSN++++  +    VSS
Subjt:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

AT3G56210.2 ARM repeat superfamily protein2.2e-5565.81Show/hide
Query:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA
        +E EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS++LL VKDPLFKRMGASRL+RF+IDDERRMK+VEMGGAQELL+MLG+AKDD+TRKEALKA
Subjt:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA

Query:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        L A+S S EA   L   GA+ ++KS PNS+ED+ ++ YKSN++++  +    VSS
Subjt:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

AT3G56210.4 ARM repeat superfamily protein2.2e-5565.81Show/hide
Query:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA
        +E EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS++LL VKDPLFKRMGASRL+RF+IDDERRMK+VEMGGAQELL+MLG+AKDD+TRKEALKA
Subjt:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA

Query:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        L A+S S EA   L   GA+ ++KS PNS+ED+ ++ YKSN++++  +    VSS
Subjt:  LHAISHSDEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS

AT3G56210.5 ARM repeat superfamily protein7.2e-5464.97Show/hide
Query:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA
        +E EAERK+GW LK+ FAGTAT++GYQ FPY+GDNL+ QS++LL VKDPLFKRMGASRL+RF+IDDERRMK+VEMGGAQELL+MLG+AKDD+TRKEALKA
Subjt:  IENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKA

Query:  LHAISHS--DEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS
        L A+S S   EA   L   GA+ ++KS PNS+ED+ ++ YKSN++++  +    VSS
Subjt:  LHAISHS--DEAVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGATCGAGAACGAGGCTGAAAGAAAAGTAGGATGGTTATTGAAACTAATCTTTGCTGGGACTGCCACATTTCTGGGATACCAGATTTTTCCATACATGGGGGATAACTT
GATGCAGCAATCTGTGGCGCTCTTACAAGTCAAGGATCCATTGTTTAAGAGGATGGGAGCATCTAGATTGGCTCGTTTTTCGATAGATGATGAAAGAAGAATGAAAATAG
TGGAGATGGGTGGAGCTCAAGAGCTCTTAAACATGTTGGGGGCTGCCAAAGACGATCGCACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACATTCAGATGAA
GCTGTTGGTGCTCTGCATAAAGCAGGGGCAATCTTGGTTATCAAATCTGCACCGAATTCAGTTGAAGATGCGAAAGTGAACGAGTACAAGTCGAACCTAATGAAGAGATT
TGAAGATCTTAGGTATGATGTCTCATCT
mRNA sequenceShow/hide mRNA sequence
GAGATCGAGAACGAGGCTGAAAGAAAAGTAGGATGGTTATTGAAACTAATCTTTGCTGGGACTGCCACATTTCTGGGATACCAGATTTTTCCATACATGGGGGATAACTT
GATGCAGCAATCTGTGGCGCTCTTACAAGTCAAGGATCCATTGTTTAAGAGGATGGGAGCATCTAGATTGGCTCGTTTTTCGATAGATGATGAAAGAAGAATGAAAATAG
TGGAGATGGGTGGAGCTCAAGAGCTCTTAAACATGTTGGGGGCTGCCAAAGACGATCGCACACGTAAGGAAGCTTTGAAGGCTTTACATGCCATCTCACATTCAGATGAA
GCTGTTGGTGCTCTGCATAAAGCAGGGGCAATCTTGGTTATCAAATCTGCACCGAATTCAGTTGAAGATGCGAAAGTGAACGAGTACAAGTCGAACCTAATGAAGAGATT
TGAAGATCTTAGGTATGATGTCTCATCT
Protein sequenceShow/hide protein sequence
EIENEAERKVGWLLKLIFAGTATFLGYQIFPYMGDNLMQQSVALLQVKDPLFKRMGASRLARFSIDDERRMKIVEMGGAQELLNMLGAAKDDRTRKEALKALHAISHSDE
AVGALHKAGAILVIKSAPNSVEDAKVNEYKSNLMKRFEDLRYDVSS