; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016394 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016394
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold1303:66117..66584
RNA-Seq ExpressionMS016394
SyntenyMS016394
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039949.1 hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa]4.1e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L+ Q  +         F  DKA+L   ++ELA LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F +IG++ GGF+  A E+  ++E  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]2.3e-3342.86Show/hide
Query:  WDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPLHL
        W++ +VLTRR F+DDW  I+  L  QL   +    F+ DKA++   NEE A+LL KN GW T G   +K E W+   H    V+PSYGGW+K R +PLH 
Subjt:  WDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPLHL

Query:  WSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        W+   F +IGD+ GGF+  A E     +  +  IK++ NY GF+PA + + D E
Subjt:  WSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

KAA0041398.1 hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa]3.2e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L  Q  +         F  DKA+L   +++LA+LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F  IG++ GGF+  A E+  +IE  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

KAA0044557.1 hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]2.4e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQP---DKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L  Q  +      + P   DKA+L   +++LA+LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQP---DKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F +IG++ GGF+  A E+  +IE  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]1.7e-4955.84Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPL
        +NW++ +V+TRRDF+DDW  ILS ++ Q + + IIN FQ DKA++KCP+++LA LL  N GWVTFGP T+K+E WNPL HG   + PSYG W+K RNIPL
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPL

Query:  HLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKD
        HLWS   F  IG++ GGF+ + D N+  IEC DV IKV+ NYCGF+PA ++  D
Subjt:  HLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKD

TrEMBL top hitse value%identityAlignment
A0A5A7TEK8 DUF4283 domain-containing protein1.1e-3342.86Show/hide
Query:  WDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPLHL
        W++ +VLTRR F+DDW  I+  L  QL   +    F+ DKA++   NEE A+LL KN GW T G   +K E W+   H    V+PSYGGW+K R +PLH 
Subjt:  WDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPLHL

Query:  WSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        W+   F +IGD+ GGF+  A E     +  +  IK++ NY GF+PA + + D E
Subjt:  WSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

A0A5A7TEP0 DUF4283 domain-containing protein1.5e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L  Q  +         F  DKA+L   +++LA+LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F  IG++ GGF+  A E+  +IE  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

A0A5A7TRS9 DUF4283 domain-containing protein1.2e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQP---DKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L  Q  +      + P   DKA+L   +++LA+LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQP---DKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F +IG++ GGF+  A E+  +IE  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

A0A5D3DLT1 DUF4283 domain-containing protein2.0e-3543.4Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN
        I+W++ ++L+RR F+DDW  I+  L+ Q  +         F  DKA+L   ++ELA LL KN GW T GP  +K E+W+   H    V+PSYGGW +FR 
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQEN---MIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRN

Query:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE
        IPLH+W+ N F +IG++ GGF+  A E+  ++E  + +IKV+ NY GF+PA + I D E
Subjt:  IPLHLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE

A0A6J1D6X4 uncharacterized protein LOC1110181868.3e-5055.84Show/hide
Query:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPL
        +NW++ +V+TRRDF+DDW  ILS ++ Q + + IIN FQ DKA++KCP+++LA LL  N GWVTFGP T+K+E WNPL HG   + PSYG W+K RNIPL
Subjt:  INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPL

Query:  HLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKD
        HLWS   F  IG++ GGF+ + D N+  IEC DV IKV+ NYCGF+PA ++  D
Subjt:  HLWSENLFCRIGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTAATTGGGACCAGGTTCTTGTCCTCACTAGAAGGGATTTCTACGATGATTGGGGGACAATCCTTTCAACTTTAGAATCTCAACTGCAAGAGAATATGATCATCAACTC
CTTCCAACCAGACAAGGCCATCCTCAAATGTCCAAATGAAGAGTTGGCAAGACTCCTAAGTAAGAATTGTGGTTGGGTCACCTTTGGTCCACACACTCTTAAAGTGGAAA
GATGGAATCCGTTAAAACATGGTCACAACACAGTGGTTCCTTCCTATGGAGGTTGGCTGAAATTCAGAAATATTCCCCTTCATTTATGGAGTGAGAATCTCTTTTGCAGA
ATAGGAGATAGCTTCGGAGGCTTTTTGACCTTCGCAGATGAGAACACAGCAAGAATTGAATGTTTGGATGTGGTCATAAAGGTTAGAGGTAATTACTGTGGGTTTGTTCC
AGCAGGGCTAACCATTAAAGACTCTGAA
mRNA sequenceShow/hide mRNA sequence
ATTAATTGGGACCAGGTTCTTGTCCTCACTAGAAGGGATTTCTACGATGATTGGGGGACAATCCTTTCAACTTTAGAATCTCAACTGCAAGAGAATATGATCATCAACTC
CTTCCAACCAGACAAGGCCATCCTCAAATGTCCAAATGAAGAGTTGGCAAGACTCCTAAGTAAGAATTGTGGTTGGGTCACCTTTGGTCCACACACTCTTAAAGTGGAAA
GATGGAATCCGTTAAAACATGGTCACAACACAGTGGTTCCTTCCTATGGAGGTTGGCTGAAATTCAGAAATATTCCCCTTCATTTATGGAGTGAGAATCTCTTTTGCAGA
ATAGGAGATAGCTTCGGAGGCTTTTTGACCTTCGCAGATGAGAACACAGCAAGAATTGAATGTTTGGATGTGGTCATAAAGGTTAGAGGTAATTACTGTGGGTTTGTTCC
AGCAGGGCTAACCATTAAAGACTCTGAA
Protein sequenceShow/hide protein sequence
INWDQVLVLTRRDFYDDWGTILSTLESQLQENMIINSFQPDKAILKCPNEELARLLSKNCGWVTFGPHTLKVERWNPLKHGHNTVVPSYGGWLKFRNIPLHLWSENLFCR
IGDSFGGFLTFADENTARIECLDVVIKVRGNYCGFVPAGLTIKDSE