CuGenDBv2

Gene ID	MS016411
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF4228 domain-containing protein
Genome location	scaffold1486:27468..27818
RNA-Seq Expression	MS016411
Synteny	MS016411
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0056859.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]

7.1e-40

77.31

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKHGR--GGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+V+AGDDWGSF+SKHGR  GGNATTSGGD EK RLLG +K AA+ +   VKIKMTK+ELE LV+KLE QGL+LE+VIGRM+KG  E+EY
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKHGR--GGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPEDY
        E+EHHRSWRPSLQSIPEDY
Subjt:  EMEHHRSWRPSLQSIPEDY

KAG6584086.1 hypothetical protein SDJN03_20018, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-33

70.09

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+++AGDDWGSF+SKH  GRGGNA+TS GD EK RLLG +K  ++    +VKIKMTK+ELEDLV+ LE +GLSLE+VIGRM    +EDE+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPE
        + EHHRSWRPSLQSIPE
Subjt:  EMEHHRSWRPSLQSIPE

XP_022140150.1 uncharacterized protein LOC111010880 [Momordica charantia]

1.7e-57

100

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM
        MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM

Query:  EHHRSWRPSLQSIPEDY
        EHHRSWRPSLQSIPEDY
Subjt:  EHHRSWRPSLQSIPEDY

XP_022933211.1 uncharacterized protein LOC111440057 [Cucurbita moschata]

1.3e-33

70.09

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+++AGDDWGSF+SKH  GRGGNA+TS GD EK RLLG +K  ++    +VKIKMTK+ELEDLV+ LE +GLSLE+VIGRM+   +EDE+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPE
        + EHHRSWRPSLQSIPE
Subjt:  EMEHHRSWRPSLQSIPE

XP_038895954.1 uncharacterized protein LOC120084128 [Benincasa hispida]

4.6e-39

76.47

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+V+ GDDWGSF+SKH  GRGGNATTSGGD EK RLLG +K AA+ +  +VKIKM+K+ELEDLV+KLE QG+SLE+VIGRMV  G EDE+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPEDY
        E+EHHRSWRPSLQSIPEDY
Subjt:  EMEHHRSWRPSLQSIPEDY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRL1 Uncharacterized protein

6.7e-36

72.73

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRG----GNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEED
        MGNCCRSQSST+V+AGDDWGSF+SKHGRG     +A TSGGD EK RLLG +K A + +   VKIKMTK+ELE LV+KLE QGLSLE+VIGRM+KG  E+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRG----GNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEED

Query:  EYEMEHHRSWRPSLQSIPEDY
        E+E+EHHRSWRPSLQSIPEDY
Subjt:  EYEMEHHRSWRPSLQSIPEDY

A0A5A7UTK3 DUF4228 domain-containing protein

3.4e-40

77.31

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKHGR--GGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+V+AGDDWGSF+SKHGR  GGNATTSGGD EK RLLG +K AA+ +   VKIKMTK+ELE LV+KLE QGL+LE+VIGRM+KG  E+EY
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKHGR--GGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPEDY
        E+EHHRSWRPSLQSIPEDY
Subjt:  EMEHHRSWRPSLQSIPEDY

A0A6J1CEB2 uncharacterized protein LOC111010880

8.2e-58

100

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM
        MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEM

Query:  EHHRSWRPSLQSIPEDY
        EHHRSWRPSLQSIPEDY
Subjt:  EHHRSWRPSLQSIPEDY

A0A6J1EYG4 uncharacterized protein LOC111440057

6.3e-34

70.09

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+++AGDDWGSF+SKH  GRGGNA+TS GD EK RLLG +K  ++    +VKIKMTK+ELEDLV+ LE +GLSLE+VIGRM+   +EDE+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPE
        + EHHRSWRPSLQSIPE
Subjt:  EMEHHRSWRPSLQSIPE

A0A6J1KIA5 uncharacterized protein LOC111495485

3.1e-33

70.09

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Query:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY
        MGNCCRSQSST+V+AGDDWGSF+SKH  GRGGNA+ S GD EK RLLG +K  ++    +VKIKMTK+ELEDLV+ LE +GLSLE+VIGRM+   +EDE+
Subjt:  MGNCCRSQSSTLVWAGDDWGSFNSKH--GRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEY

Query:  EMEHHRSWRPSLQSIPE
        + EHHRSWRPSLQSIPE
Subjt:  EMEHHRSWRPSLQSIPE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.

2.9e-07

31.09

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Query:  MGNCCRSQSSTLVWAGDDWGSF----NSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEED
        MGNC R +S  + WAG+DW  F       H      T  G     + ++  + + ++  + E+KI++TKK+L DL+ K+    L+ ++            
Subjt:  MGNCCRSQSSTLVWAGDDWGSF----NSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEED

Query:  EYEMEHHRSWRPSLQSIPE
          E    R WRP LQSIPE
Subjt:  EYEMEHHRSWRPSLQSIPE

AT4G21920.1 unknown protein

1.2e-13

33.86

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Query:  MGNC-CRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLG------PKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMV-KG
        MGNC C ++ +T  W+GDD GS+N +  R  +      + + ++LLG         +++++   E+KI++TKKELEDL+  +  + L+ EE++ +++ +G
Subjt:  MGNC-CRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLG------PKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMV-KG

Query:  GEEDEYE----MEHHRSWRPSLQSIPE
        G++  +       HH+ W+P LQSIPE
Subjt:  GEEDEYE----MEHHRSWRPSLQSIPE

Sequences

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CDS sequence

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ATGGGTAACTGTTGCAGAAGCCAGTCCTCTACATTGGTGTGGGCCGGAGACGATTGGGGCTCCTTCAATTCCAAGCACGGCCGCGGCGGAAACGCAACCACGTCCGGCGG
CGATACTGAGAAGCAGAGGCTACTTGGCCCAAAAAAAGCAGCGGCAACGGCGGCGGCGGGGGAAGTGAAAATCAAGATGACGAAGAAAGAGCTGGAGGATCTGGTGGAAA
AGCTAGAGAAGCAAGGGCTGAGCCTGGAAGAAGTTATTGGGCGGATGGTGAAGGGCGGCGAAGAAGATGAATATGAAATGGAGCACCACCGGTCATGGAGGCCTTCTCTT
CAGAGCATTCCAGAGGATTAC

mRNA sequence

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Protein sequence

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MGNCCRSQSSTLVWAGDDWGSFNSKHGRGGNATTSGGDTEKQRLLGPKKAAATAAAGEVKIKMTKKELEDLVEKLEKQGLSLEEVIGRMVKGGEEDEYEMEHHRSWRPSL
QSIPEDY

MS016411 (gene) of Bitter gourd (TR) v1 genome