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MS016413 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016413
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1486:35816..36154
RNA-Seq ExpressionMS016413
SyntenyMS016413
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4183.19Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLRIGRRLKKL+K+MS  + TARIGICKQ GQLRTCKSLFGR 
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
         K E LAFPSLVS
Subjt:  RKVETLAFPSLVS

KAG7019685.1 hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4082.3Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSGSRRR +CLRIRIRKFKLRIGRRLKKL+K+MS  + TAR GICKQ GQLRTCKSLFGR 
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
         K E LAFPSLVS
Subjt:  RKVETLAFPSLVS

KGN64527.1 hypothetical protein Csa_013452 [Cucumis sativus]1.3e-3573.87Show/hide
Query:  MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGR
        MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKLR+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+
Subjt:  MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGR

Query:  GRKVETLAFPS
          KVETL FP+
Subjt:  GRKVETLAFPS

XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]3.5e-52100Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
        RKVETLAFPSLVS
Subjt:  RKVETLAFPSLVS

XP_023001322.1 uncharacterized protein LOC111495486 [Cucurbita maxima]1.2e-3981.42Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSG+RRR +CLRIRIRKFKLRIGRRLKKL+K+MS    TAR GICKQ GQLRTCKSLFGR 
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
         K E LAFPSLVS
Subjt:  RKVETLAFPSLVS

TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein6.5e-3673.87Show/hide
Query:  MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGR
        MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKLR+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+
Subjt:  MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGR

Query:  GRKVETLAFPS
          KVETL FP+
Subjt:  GRKVETLAFPS

A0A6J1CEK3 uncharacterized protein LOC1110107961.7e-52100Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
        RKVETLAFPSLVS
Subjt:  RKVETLAFPSLVS

A0A6J1KG77 uncharacterized protein LOC1114954865.7e-4081.42Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG
        MS ++TR+Q+GYSRMEKEDPEEKKHR+AQFLIYKIMEQANSG+RRR +CLRIRIRKFKLRIGRRLKKL+K+MS    TAR GICKQ GQLRTCKSLFGR 
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRG

Query:  RKVETLAFPSLVS
         K E LAFPSLVS
Subjt:  RKVETLAFPSLVS

M5WJH3 Uncharacterized protein4.8e-2359.63Show/hide
Query:  ILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRGRK
        ++ RK   YS+M+KEDPEE  HR AQFLIYK+++QA   +RRRP  LRIRIRK KL+IGRRLKKLRKSM  S+S AR+ + KQ+  QL+TCK+LFGRG  
Subjt:  ILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRGRK

Query:  VETLAFPSL
            + P+L
Subjt:  VETLAFPSL

W9RFE3 Uncharacterized protein6.3e-2360.2Show/hide
Query:  ILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRG
        ++ RK + YS+++KEDPEE+  R AQFLIYK+MEQA+S SRRRP+ LRIRIRK K++IG+RL KLRKSM  S+S A++ +CKQ+  Q +TC+ LFG G
Subjt:  ILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQI-GQLRTCKSLFGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein1.5e-0840.86Show/hide
Query:  YSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP--TCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQ--LRTCKSLFGRG
        YS+M+KEDPEE   R A+FLIYK +++A+  SRR P  + +R+++   K++IG+RL KLR+S+   +S  R G  ++     +R  K +F  G
Subjt:  YSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP--TCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQ--LRTCKSLFGRG

AT4G04745.1 unknown protein4.3e-0839.74Show/hide
Query:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP-------TCLRIRIRKFKLRIGRRLKKLRKS
        M++++      Y++MEKEDP+E  HR AQFLI K++E+A+S +R+           + IR+   ++RIG++L+KLRK+
Subjt:  MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRP-------TCLRIRIRKFKLRIGRRLKKLRKS

AT4G21902.1 unknown protein1.0e-0436.49Show/hide
Query:  LTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQAN----SGSRRRPTCLRI---RIRKFKLRIGRRLKKLRKS
        + +  + Y+++EKED  E  HR AQFLI+KI+++A+       ++R T +++   R+   +++IG++L+KLRKS
Subjt:  LTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQAN----SGSRRRPTCLRI---RIRKFKLRIGRRLKKLRKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGA
GCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGG
CCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCT
TTGGTTTCT
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTTATATTGACAAGGAAGCAGAGTGGTTACTCAAGAATGGAGAAGGAAGACCCAGAAGAGAAAAAGCATAGGGAAGCTCAGTTCTTGATTTACAAAATAATGGA
GCAGGCAAACAGTGGCAGTAGGAGGAGACCCACTTGTCTCAGAATCAGAATTCGCAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGCTGAGGAAGAGCATGTCGG
CCAGTTTGTCCACAGCAAGAATTGGGATCTGCAAGCAAATTGGACAGCTTAGAACCTGTAAGAGCTTGTTTGGAAGAGGCCGCAAGGTGGAAACTTTAGCTTTTCCTTCT
TTGGTTTCT
Protein sequenceShow/hide protein sequence
MSVILTRKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKLRIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS
LVS