; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016416 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016416
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description15.4 kDa class V heat shock protein
Genome locationscaffold1486:56400..56882
RNA-Seq ExpressionMS016416
SyntenyMS016416
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADU55781.1 HSP15 [Citrullus lanatus]6.4e-5085.16Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL   FPP LL+PY+HY IP NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRSFRR+SVI    SPD  QLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

XP_022140087.1 15.4 kDa class V heat shock protein [Momordica charantia]1.2e-6499.22Show/hide
Query:  PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLE
        PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEE AKSFSRKFRLPVLVDVDAISAGFENGVLE
Subjt:  PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLE

Query:  ITVPRSFRRASVILPTDSPDQLQLLARAA
        ITVPRSFRRASVILPTDSPDQLQLLARAA
Subjt:  ITVPRSFRRASVILPTDSPDQLQLLARAA

XP_022933175.1 15.4 kDa class V heat shock protein [Cucurbita moschata]5.2e-5284.38Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL N   P LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRS R  SVI  TDS DQLQLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

XP_023001317.1 15.4 kDa class V heat shock protein [Cucurbita maxima]1.5e-5486.72Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL N  PP LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRSFR  SVI  TDSPDQLQLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

XP_038894889.1 15.4 kDa class V heat shock protein [Benincasa hispida]8.1e-5385.94Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL N FPP LL+PY+HY IP NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGV  PAKSFSRKFRLPVL+DVD ISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRSFRR+SVI    SPDQLQLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

TrEMBL top hitse value%identityAlignment
A0A0A0LUT8 SHSP domain-containing protein1.9e-4784.55Show/hide
Query:  PPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-S
        P  LL+PYYHY+IP NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAV+GV  PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR S
Subjt:  PPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-S

Query:  FRRASVILPTDSPDQLQLLARAA
        FRR SV+    SPDQ QLLARAA
Subjt:  FRRASVILPTDSPDQLQLLARAA

A0A6J1CFU3 15.4 kDa class V heat shock protein5.8e-6599.22Show/hide
Query:  PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLE
        PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEE AKSFSRKFRLPVLVDVDAISAGFENGVLE
Subjt:  PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLE

Query:  ITVPRSFRRASVILPTDSPDQLQLLARAA
        ITVPRSFRRASVILPTDSPDQLQLLARAA
Subjt:  ITVPRSFRRASVILPTDSPDQLQLLARAA

A0A6J1F477 15.4 kDa class V heat shock protein2.5e-5284.38Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL N   P LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRS R  SVI  TDS DQLQLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

A0A6J1KG72 15.4 kDa class V heat shock protein7.1e-5586.72Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL N  PP LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEVEDSRYLIIRT+AVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRSFR  SVI  TDSPDQLQLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

H6TB34 HSP153.1e-5085.16Show/hide
Query:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI
        SL   FPP LL+PY+HY IP NYVHWVQT DSH+FSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGV  PAKSFSRKFRLPVLVDVDAISAGFENGVLEI
Subjt:  SLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEI

Query:  TVPRSFRRASVILPTDSPDQLQLLARAA
        TVPRSFRR+SVI    SPD  QLLARAA
Subjt:  TVPRSFRRASVILPTDSPDQLQLLARAA

SwissProt top hitse value%identityAlignment
O49710 15.4 kDa class V heat shock protein1.3e-2959.09Show/hide
Query:  QNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVILPTDSP
        +N+V W Q+PDSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +   ++P K+F RKFRLP  +D+  ISAG+E+GVL + VP+      +I P+D P
Subjt:  QNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVILPTDSP

Query:  DQLQLLARAA
        + LQLLARAA
Subjt:  DQLQLLARAA

P27777 16.9 kDa class I heat shock protein 19.7e-1745.65Show/hide
Query:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS
        + W +TP+SH+F ADLPGV+KEE+KVEVE+   L+I          + +    VE  +  F R+FRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS

Q05832 18.3 kDa class I heat shock protein1.3e-1646.74Show/hide
Query:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS
        + W +TP++H+F ADLPGV+KEE+KVEVED   L I          + +    VE  +  F RKFRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS

Q7EZ57 18.8 kDa class V heat shock protein3.8e-2152.04Show/hide
Query:  NYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPA------KSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVIL
        ++V W +T  +H++SA LPGVRKEEI+VEVED+ YL+IRTE  DG +         +SF+RKFRLP +VD D ISA + +GVL +TVPR   RA  ++
Subjt:  NYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPA------KSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVIL

Q943E6 16.9 kDa class I heat shock protein 29.7e-1745.65Show/hide
Query:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS
        + W +TP+SH+F ADLPGV+KEE+KVEVE+   L+I          + +    VE  +  F R+FRLP    VD + AG ENGVL +TVP++
Subjt:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein3.8e-1643.3Show/hide
Query:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR
        AI    V W +T ++H+F ADLPG++KEE+KVE+ED   L I          + +    VE  +  FSRKF+LP  V +D + A  ENGVL +TVP+
Subjt:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR

AT1G53540.1 HSP20-like chaperones superfamily protein2.9e-1646.15Show/hide
Query:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR
        V W +TP++H+F ADLPG+RKEE+KVEVED   L I  E  +           VE  +  F+R+FRLP    ++ I A  ENGVL +TVP+
Subjt:  VHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVD----------GVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR

AT1G59860.1 HSP20-like chaperones superfamily protein1.7e-1644.33Show/hide
Query:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR
        AI    V W +T ++H+F ADLPG++KEE+KVE+ED   L I          + +    VE  +  FSRKFRLP  V +D + A  ENGVL +TVP+
Subjt:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR

AT2G29500.1 HSP20-like chaperones superfamily protein2.9e-1641.84Show/hide
Query:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS
        AI    V W +TP++H+F ADLPG++KEE+KVE+E+   L I          + +    VE  +  F+R+FRLP  V +D + A  ENGVL +TVP++
Subjt:  AIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLII----------RTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS

AT4G21870.1 HSP20-like chaperones superfamily protein9.3e-3159.09Show/hide
Query:  QNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVILPTDSP
        +N+V W Q+PDSH FS DLPG+RKEEIKVE+EDS YLIIRTEA  +   ++P K+F RKFRLP  +D+  ISAG+E+GVL + VP+      +I P+D P
Subjt:  QNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEA--VDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASVILPTDSP

Query:  DQLQLLARAA
        + LQLLARAA
Subjt:  DQLQLLARAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTTCTTTACGTAATCCATTTCCTCCTCATCTCCTCTATCCCTACTACCATTACGCCATTCCTCAGAACTACGTGCACTGGGTACAAACCCCTGACTCTCATATTTTCTC
GGCCGATCTCCCAGGTGTTCGGAAAGAGGAGATAAAAGTGGAGGTTGAGGATTCGCGGTACCTGATTATTCGAACAGAGGCCGTCGATGGAGTCGAGGAGCCTGCGAAGA
GCTTCTCGAGGAAGTTTCGGCTTCCGGTTCTGGTCGATGTAGATGCGATTTCGGCCGGGTTCGAGAATGGAGTTCTGGAGATTACGGTGCCTAGATCTTTCAGGAGAGCC
TCTGTCATCCTGCCGACTGATTCACCCGATCAACTTCAACTCCTCGCTAGGGCTGCT
mRNA sequenceShow/hide mRNA sequence
CCTTCTTTACGTAATCCATTTCCTCCTCATCTCCTCTATCCCTACTACCATTACGCCATTCCTCAGAACTACGTGCACTGGGTACAAACCCCTGACTCTCATATTTTCTC
GGCCGATCTCCCAGGTGTTCGGAAAGAGGAGATAAAAGTGGAGGTTGAGGATTCGCGGTACCTGATTATTCGAACAGAGGCCGTCGATGGAGTCGAGGAGCCTGCGAAGA
GCTTCTCGAGGAAGTTTCGGCTTCCGGTTCTGGTCGATGTAGATGCGATTTCGGCCGGGTTCGAGAATGGAGTTCTGGAGATTACGGTGCCTAGATCTTTCAGGAGAGCC
TCTGTCATCCTGCCGACTGATTCACCCGATCAACTTCAACTCCTCGCTAGGGCTGCT
Protein sequenceShow/hide protein sequence
PSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEVEDSRYLIIRTEAVDGVEEPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRA
SVILPTDSPDQLQLLARAA