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MS016499 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016499
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem I assembly protein Ycf4
Genome locationscaffold657:189755..189844
RNA-Seq ExpressionMS016499
SyntenyMS016499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QGQ49153.1 photosystem I assembly protein ycf4 [Eria corneri]2.1e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
QGX05818.1 photosystem I assembly protein Ycf4 [Dracaena angustifolia]2.1e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
YP_009347715.1 photosystem I assembly protein ycf4 [Anoectochilus emeiensis]3.2e-0583.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LTHTD+NL PREIEQKA EL YFLC+PIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
YP_009349285.1 photosystem I assembly protein Ycf4 [Symplocarpus renifolius]2.1e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
YP_009861215.1 photosystem I assembly protein Ycf4 [Orontium aquaticum]2.1e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
TrEMBL top hitse value%identityAlignment
A0A0U2DUT4 Photosystem I assembly protein Ycf41.6e-0583.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LTHTD+NL PREIEQKA EL YFLC+PIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
A0A1Q2SQ86 Photosystem I assembly protein Ycf41.6e-0583.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LTHTD+NL PREIEQKA EL YFLC+PIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
A0A5J6NAJ5 Photosystem I assembly protein Ycf41.0e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
A0A6B9TWI2 Photosystem I assembly protein Ycf41.0e-0483.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFLCVPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
A0A7T0P7W4 Photosystem I assembly protein Ycf41.6e-0583.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LTHTD+NL PREIEQKA EL YFLC+PIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
SwissProt top hitse value%identityAlignment
A0A346 Photosystem I assembly protein Ycf46.8e-0680Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
A0ZZ46 Photosystem I assembly protein Ycf46.8e-0680Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
Q2QD78 Photosystem I assembly protein Ycf43.1e-0683.33Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TDQNL PREIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
Q49KY7 Photosystem I assembly protein Ycf46.8e-0680Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
Q8S8W6 Photosystem I assembly protein Ycf46.8e-0680Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        LT TD+NL PREIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
Arabidopsis top hitse value%identityAlignment
ATCG00520.1 unfolded protein binding5.9e-0570Show/hide
Query:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV
        L  TD+N   REIEQKA EL YFL VPIEV
Subjt:  LTHTDQNLIPREIEQKAVELVYFLCVPIEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGACTCATACCGATCAGAATCTGATCCCACGAGAAATTGAGCAAAAGGCTGTCGAATTGGTCTATTTCTTGTGTGTACCAATTGAAGTT
mRNA sequenceShow/hide mRNA sequence
TTGACTCATACCGATCAGAATCTGATCCCACGAGAAATTGAGCAAAAGGCTGTCGAATTGGTCTATTTCTTGTGTGTACCAATTGAAGTT
Protein sequenceShow/hide protein sequence
LTHTDQNLIPREIEQKAVELVYFLCVPIEV