; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016512 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016512
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPeptide deformylase
Genome locationscaffold657:337210..342053
RNA-Seq ExpressionMS016512
SyntenyMS016512
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152139.1 peptide deformylase 1B, chloroplastic [Momordica charantia]1.9e-15299.64Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAA SADLEFEAPLKIVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
        MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS

XP_022928203.1 peptide deformylase 1B, chloroplastic [Cucurbita moschata]9.0e-13489.74Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLHLSL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD ASSADLEFEAPL+IVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFP IYADV+RPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

XP_022989167.1 peptide deformylase 1B, chloroplastic [Cucurbita maxima]6.9e-13489.38Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLH+SL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD ASSADLEFEAPL+IVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKT+LFNEGCLSFPRIYADV+RPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

XP_023530509.1 peptide deformylase 1B, chloroplastic [Cucurbita pepo subsp. pepo]5.8e-13389.38Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLHLSL HALLP   RR ALP V RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD ASSADLEFEAPL+IVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFPRIYADV+RPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGL SPERIEN RT+KKVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

XP_038904020.1 peptide deformylase 1B, chloroplastic [Benincasa hispida]8.4e-13289.38Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        M YT RLHLSL HALLP   RRL+LPAVFRRLS F  T +FFSH SK RPPST+VYAQAKRGFSAKEDD A S DLEFEAPLKIVEYPD ILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRV+RYSKKTVLFNEGCLSFP IYADVERPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        M NLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIR QLQALEKKYE++TGLPSPERIENFRT +KVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

TrEMBL top hitse value%identityAlignment
A0A0A0LG66 Peptide deformylase1.1e-12685.92Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAY  RLH+SL HALLP     L+ PAVFRRLS FSST + FSHSSK + PSTLVYAQAKRGFSAKEDD ASS DLEFEAPLKIVEYPDPILRAKNKRI 
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFP IYADVERPES+KIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
        MVNLSGL ARVFQHEFDHLQG LFFDRMTDEVL+TIR QLQALEKKYE+RTGLPSPERIENFR K     G GFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS

A0A1S3B8C2 Peptide deformylase1.3e-12586.45Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYT RLH+SL  ALLP     L+ P VFRRLS FSST    SHSSK R PSTLVYAQAKRGF AKEDD ASS DLEFEAPLKIVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTV FNEGCLSFP IYADVERPES+KIDARDI GTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGL ARVFQHEFDHLQGILFFDRMTDEVL+TIR QLQALEKKYE+RTGLPSPERIENFR  +KVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

A0A6J1DF55 Peptide deformylase9.3e-15399.64Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAA SADLEFEAPLKIVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
        MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS

A0A6J1EN89 Peptide deformylase4.3e-13489.74Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLHLSL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD ASSADLEFEAPL+IVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFP IYADV+RPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

A0A6J1JF23 Peptide deformylase3.3e-13489.38Show/hide
Query:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID
        MAYTARLH+SL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD ASSADLEFEAPL+IVEYPDPILRAKNKRID
Subjt:  MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRID

Query:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF
        SFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKT+LFNEGCLSFPRIYADV+RPESVKIDARDISGTRF
Subjt:  SFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRF

Query:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG
        MVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  MVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYG

SwissProt top hitse value%identityAlignment
B1XJP0 Peptide deformylase7.9e-3242.11Show/hide
Query:  PLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA
        PL++    D +LR K KRI   DD ++ L  EM   MY + GIGL+APQVGVN +L+V +   E      +VL+NP + ++ ++   F EGCLS P ++ 
Subjt:  PLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA

Query:  DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEV
        DV RP+ +++  RD  G    +  SGL +RV QHE DHL G++F DR+ +E+
Subjt:  DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEV

Q5VNN5 Peptide deformylase 1B, chloroplastic2.4e-8164.63Show/hide
Query:  SKLRPPSTLVYAQAKRGFS--------AKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLM
        S++   + L  A+A+RGF         A+++D A++ADL+FE PLK+V+YPDPILRA+NKRI++FDDNL+ L  EMFDVMYKTDGIGLSAPQVGVNVQLM
Subjt:  SKLRPPSTLVYAQAKRGFS--------AKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLM

Query:  VFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIR
        VFNP G +GEGEEIVLVNP V++ SK+ +++ EGCLSFP IYA+V RP++VKIDA+D++G +  V LSGL ARVFQHEFDHLQGILFFDRM+ +VL+++R
Subjt:  VFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIR

Query:  AQLQALEKKYEERTGLPSPERIENFRTKK
          L+ LEKKYEE TGL SPE IEN++ +K
Subjt:  AQLQALEKKYEERTGLPSPERIENFRTKK

Q7UHZ5 Peptide deformylase2.2e-3441.71Show/hide
Query:  PLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA
        PL I+ +P P LR  ++ I   D  LK +  EM D+MY+ DG+GL+A QV + +++ V NP G+R EGE  V++NP + R  K      EGCLS P +Y 
Subjt:  PLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYA

Query:  DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPS
         V+RP++V++   D+ G      L G  ARV QHE DHL GI+FFDR+ +E L  +   L+  +  YE + G  S
Subjt:  DVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPS

Q9FUZ2 Peptide deformylase 1B, chloroplastic/mitochondrial2.0e-9164.68Show/hide
Query:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK
        L  P   R+ LP + RR +  S       ST  F S  ++  P ++ V A+ KR  S K+D  AS+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK
Subjt:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK

Query:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL
         LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI+G RF ++LS L
Subjt:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL

Query:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK
        PAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYEE+TGLPSPER+E    ++K  AG GFGK
Subjt:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK

Q9FV54 Peptide deformylase 1B, chloroplastic2.7e-9371.72Show/hide
Query:  SSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKE--DDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVN
        S+   FFS SS  +PP   VYAQA+R  S+K   D+ A+ ADL F  PLKIVEYPDPILRAKNKRID+FD NLKKLV EMFD+MYKTDGIGLSAPQVG+N
Subjt:  SSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKE--DDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVHEMFDVMYKTDGIGLSAPQVGVN

Query:  VQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVL
        VQLMVFN  GERGEGEEIVLVNPRV RYS++ + + EGCLSFP I+ DV+RPESVK+DA+DI+GTRF ++LS LPARVFQHEFDHLQG+LFFD+MTDEVL
Subjt:  VQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVL

Query:  DTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS
        DTIR +L ALEKKYE+RTGLP+PE I   + KK   A  GFGKS
Subjt:  DTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A3.4e-2235.09Show/hide
Query:  KIVEYPDPILRAKNKRIDSFD---DNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPRVFRYSKKT
        +IV   DP+L  K + +D  +   + ++K++ +M  VM    G+GL+APQ+GV ++++V                   ER   + +V+VNP +   S K 
Subjt:  KIVEYPDPILRAKNKRIDSFD---DNLKKLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPRVFRYSKKT

Query:  VLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTI
         LF EGCLS     A VER   V +   D  G R  VN SG  AR+ QHE DHL G L+ D+M      T+
Subjt:  VLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGILFFDRMTDEVLDTI

AT5G14660.1 peptide deformylase 1B1.4e-9264.68Show/hide
Query:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK
        L  P   R+ LP + RR +  S       ST  F S  ++  P ++ V A+ KR  S K+D  AS+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK
Subjt:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK

Query:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL
         LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI+G RF ++LS L
Subjt:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL

Query:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK
        PAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYEE+TGLPSPER+E    ++K  AG GFGK
Subjt:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK

AT5G14660.2 peptide deformylase 1B1.4e-9264.68Show/hide
Query:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK
        L  P   R+ LP + RR +  S       ST  F S  ++  P ++ V A+ KR  S K+D  AS+ D++FE PLKIVEYPDPILRAKNKRID FD+NLK
Subjt:  LLPPAYRRLALPAVFRRLSCFS-------STSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK

Query:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL
         LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNP++ +YS K V F+EGCLSFP IYA+V RP+SVKIDARDI+G RF ++LS L
Subjt:  KLVHEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGL

Query:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK
        PAR+FQHE+DHL+G+LFFDRMTD+VLD+IR +L+ALEKKYEE+TGLPSPER+E    ++K  AG GFGK
Subjt:  PARVFQHEFDHLQGILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACACGGCTCGATTACACCTTTCACTGCATCATGCTCTTCTTCCTCCGGCATACCGTCGCTTGGCTCTTCCCGCCGTTTTCCGCCGGCTGAGCTGTTTTTCTTC
AACTAGCCAGTTCTTCTCCCACTCGAGTAAGCTCAGACCTCCGTCGACTCTTGTTTACGCGCAGGCCAAGCGAGGCTTCTCTGCCAAAGAAGACGATGCAGCTTCGTCTG
CTGATCTTGAATTTGAGGCGCCGCTCAAAATTGTGGAATATCCGGACCCAATACTCAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGCTAGTG
CACGAAATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTGCAACTGATGGTATTTAATCCAGTCGGTGAACGAGGTGA
AGGGGAGGAAATTGTTCTAGTAAACCCAAGAGTTTTCAGATATTCCAAGAAAACTGTACTCTTCAATGAAGGTTGTTTGTCATTCCCGAGGATATATGCTGATGTAGAGA
GACCAGAATCAGTTAAGATCGATGCACGAGACATCAGCGGTACAAGGTTCATGGTCAACTTGTCAGGGCTCCCTGCAAGGGTTTTCCAGCATGAATTTGACCATTTGCAG
GGAATTTTGTTCTTTGACAGAATGACGGATGAAGTACTCGATACCATTCGTGCTCAGCTGCAGGCCCTGGAAAAGAAGTATGAGGAGAGAACTGGATTACCAAGTCCTGA
AAGAATAGAGAACTTCAGAACAAAGAAGAAAGTTGCTGCTGGTTATGGTTTTGGAAAGTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTACACGGCTCGATTACACCTTTCACTGCATCATGCTCTTCTTCCTCCGGCATACCGTCGCTTGGCTCTTCCCGCCGTTTTCCGCCGGCTGAGCTGTTTTTCTTC
AACTAGCCAGTTCTTCTCCCACTCGAGTAAGCTCAGACCTCCGTCGACTCTTGTTTACGCGCAGGCCAAGCGAGGCTTCTCTGCCAAAGAAGACGATGCAGCTTCGTCTG
CTGATCTTGAATTTGAGGCGCCGCTCAAAATTGTGGAATATCCGGACCCAATACTCAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGCTAGTG
CACGAAATGTTTGATGTAATGTATAAAACTGATGGTATTGGGCTCTCAGCACCTCAAGTGGGAGTTAATGTGCAACTGATGGTATTTAATCCAGTCGGTGAACGAGGTGA
AGGGGAGGAAATTGTTCTAGTAAACCCAAGAGTTTTCAGATATTCCAAGAAAACTGTACTCTTCAATGAAGGTTGTTTGTCATTCCCGAGGATATATGCTGATGTAGAGA
GACCAGAATCAGTTAAGATCGATGCACGAGACATCAGCGGTACAAGGTTCATGGTCAACTTGTCAGGGCTCCCTGCAAGGGTTTTCCAGCATGAATTTGACCATTTGCAG
GGAATTTTGTTCTTTGACAGAATGACGGATGAAGTACTCGATACCATTCGTGCTCAGCTGCAGGCCCTGGAAAAGAAGTATGAGGAGAGAACTGGATTACCAAGTCCTGA
AAGAATAGAGAACTTCAGAACAAAGAAGAAAGTTGCTGCTGGTTATGGTTTTGGAAAGTCA
Protein sequenceShow/hide protein sequence
MAYTARLHLSLHHALLPPAYRRLALPAVFRRLSCFSSTSQFFSHSSKLRPPSTLVYAQAKRGFSAKEDDAASSADLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLV
HEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPRVFRYSKKTVLFNEGCLSFPRIYADVERPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQ
GILFFDRMTDEVLDTIRAQLQALEKKYEERTGLPSPERIENFRTKKKVAAGYGFGKS