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MS016520 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016520
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2
Genome locationscaffold657:449389..449502
RNA-Seq ExpressionMS016520
SyntenyMS016520
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001280 - Photosystem I PsaA/PsaB
IPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBB12368.1 Photosystem I P700 chlorophyll A apoprotein, partial [Vanilla cf. phalaenopsis AB-2009]6.3e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
YP_009263860.1 photosystem I P700 chlorophyll a [Dactyladenia bellayana]6.3e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
YP_009743589.1 photosystem I P700 chlorophyll a apoprotein A2 [Amorphophallus konjac]6.3e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
YP_009769837.1 photosystem I P700 apoprotein A2 [Labichea lanceolata]6.3e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
YP_009945416.1 photosystem I P700 apoprotein A2 [Sechium edule]6.3e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
TrEMBL top hitse value%identityAlignment
A0A1P8J737 Photosystem I P700 chlorophyll a apoprotein A23.1e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
A0A1X9QHA3 Photosystem I P700 chlorophyll a apoprotein A23.1e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
A0A218KG43 Photosystem I P700 chlorophyll a apoprotein A23.1e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
A0A346Q3G8 Photosystem I P700 chlorophyll a apoprotein A23.1e-0690.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
A0A3B6CD48 Photosystem I2.4e-0690Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAH
        AIAFIFL+A H+YRTNFGIGHSIKDFLEAH
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAH
SwissProt top hitse value%identityAlignment
A6MMK6 Photosystem I P700 chlorophyll a apoprotein A21.4e-0887.1Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAF+FLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
Q06FW4 Photosystem I P700 chlorophyll a apoprotein A21.4e-0887.1Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAF+FLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
Q09MH9 Photosystem I P700 chlorophyll a apoprotein A28.3e-0990.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A28.3e-0990.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
Q6EW49 Photosystem I P700 chlorophyll a apoprotein A28.3e-0990.32Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIAFIFLVA H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein6.5e-0980.65Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
        AIA +FL+A H+YRTNFGIGHSIKD LEAHI
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAHI
ATCG00350.1 Photosystem I, PsaA/PsaB protein2.1e-0773.33Show/hide
Query:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAH
        AIA +FL+A H+YRTN+GIGH IKD LEAH
Subjt:  AIAFIFLVARHIYRTNFGIGHSIKDFLEAH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTATTGCATTTATTTTTCTTGTTGCTCGTCATATATATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATTTTTTAGAAGCACATATTTTGTCGGAGGACCATTG
GAGC
mRNA sequenceShow/hide mRNA sequence
GCTATTGCATTTATTTTTCTTGTTGCTCGTCATATATATAGAACTAACTTCGGGATTGGACACAGTATAAAAGATTTTTTAGAAGCACATATTTTGTCGGAGGACCATTG
GAGC
Protein sequenceShow/hide protein sequence
AIAFIFLVARHIYRTNFGIGHSIKDFLEAHILSEDHWS