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MS016523 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016523
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome locationscaffold657:468804..468983
RNA-Seq ExpressionMS016523
SyntenyMS016523
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009680687.1 NADH dehydrogenase subunit 7 [Grona heterocarpos]1.5e-1468.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
YP_009974360.1 NADH-plastoquinone oxidoreductase subunit 7 [Uraria lagopodoides]1.5e-1468.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
YP_010033616.1 NADH-plastoquinone oxidoreductase subunit 7 [Christia vespertilionis]1.5e-1468.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
YP_010033699.1 NADH-plastoquinone oxidoreductase subunit 7 [Urariopsis brevissima]1.5e-1468.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
YP_010158943.1 NADH-plastoquinone oxidoreductase subunit 7 [Alysicarpus vaginalis]1.5e-1468.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
TrEMBL top hitse value%identityAlignment
A0A510BUQ4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic7.5e-1568.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
A0A6H0EFW2 NADH-quinone oxidoreductase subunit D7.5e-1568.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
A0A7G7YL47 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic7.5e-1568.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
A0A7S7ACB4 NADH-plastoquinone oxidoreductase subunit 77.5e-1568.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
A0A7S7ACI9 NADH-plastoquinone oxidoreductase subunit 77.5e-1568.18Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
SwissProt top hitse value%identityAlignment
A4GGF2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic2.2e-1665.15Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWK------VQLFFDRDAEYHKLITQNPIFYD
        R+RE IYDLFEA TGMRMMHNFFRI  VATDLPYGW          F    AEY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWK------VQLFFDRDAEYHKLITQNPIFYD
A6MMQ7 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic2.9e-1663.64Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+REL+YDLFEA+TGMRMMHN+FRI  VA DLP+GW          F  R AEY KLIT+NPIF D
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
Q06GL1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic2.9e-1665.15Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWKVQLFFDRD------AEYHKLITQNPIFYD
        R+REL+YDLFEA TGMRMMHN+FRI  VATDLPYGW  + F   D       EY KLITQNPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWKVQLFFDRD------AEYHKLITQNPIFYD
Q2PMN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic4.5e-1766.67Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWK------VQLFFDRDAEYHKLITQNPIFYD
        R+RELIYDLFEA TGMRMMHNFFRI  VATDLPYGW          F  R  EY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWK------VQLFFDRDAEYHKLITQNPIFYD
Q9BBN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic5.0e-1663.64Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RE IYDLFEA TGMRMMHNFFRI  VA DLP+GW          FF R  EY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
Arabidopsis top hitse value%identityAlignment
ATCG01110.1 NAD(P)H dehydrogenase subunit H3.0e-1659.09Show/hide
Query:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD
        R+RE +YDLFEA TGMRMMHNFFRI  +A DLPYGW          F     EY KLIT+NPIF +
Subjt:  RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGW------KVQLFFDRDAEYHKLITQNPIFYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGACAAAGAGAATTAATATATGATCTATTCGAAGCAACCACCGGTATGAGAATGATGCATAATTTTTTTCGTATTAGGGAAGTCGCGACTGATCTACCTTATGGCTGGAA
AGTGCAATTATTTTTTGACAGGGATGCTGAGTATCATAAACTTATTACACAAAATCCTATTTTCTACGAC
mRNA sequenceShow/hide mRNA sequence
AGACAAAGAGAATTAATATATGATCTATTCGAAGCAACCACCGGTATGAGAATGATGCATAATTTTTTTCGTATTAGGGAAGTCGCGACTGATCTACCTTATGGCTGGAA
AGTGCAATTATTTTTTGACAGGGATGCTGAGTATCATAAACTTATTACACAAAATCCTATTTTCTACGAC
Protein sequenceShow/hide protein sequence
RQRELIYDLFEATTGMRMMHNFFRIREVATDLPYGWKVQLFFDRDAEYHKLITQNPIFYD