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MS016534 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016534
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationscaffold657:627876..628046
RNA-Seq ExpressionMS016534
SyntenyMS016534
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152195.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]1.4e-1270.18Show/hide
Query:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALYTS
        MN PC +EVEV+   E+ENVGVSP  AT KGQN  K+KGNVD PHVE K CGALYTS
Subjt:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALYTS

TrEMBL top hitse value%identityAlignment
A0A6J1DE70 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X19.6e-0454.55Show/hide
Query:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALY
        MNAPC D              VSPPNATTKGQNDRK+K    G HV+C  C ALY
Subjt:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALY

A0A6J1DFA9 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X29.6e-0454.55Show/hide
Query:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALY
        MNAPC D              VSPPNATTKGQNDRK+K    G HV+C  C ALY
Subjt:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALY

A0A6J1DGW5 zinc finger BED domain-containing protein RICESLEEPER 2-like6.6e-1370.18Show/hide
Query:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALYTS
        MN PC +EVEV+   E+ENVGVSP  AT KGQN  K+KGNVD PHVE K CGALYTS
Subjt:  MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALYTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCCCCTTGTGGAGATGAGGTTGAGGTTGAGGTCGCGAACGAGAATGAAAATGTCGGTGTATCTCCACCAAATGCAACTACGAAAGGTCAAAACGATAGGAAGCA
AAAAGGTAATGTTGATGGTCCTCATGTCGAGTGCAAAAAATGTGGTGCTTTATATACTAGT
mRNA sequenceShow/hide mRNA sequence
ATGAATGCCCCTTGTGGAGATGAGGTTGAGGTTGAGGTCGCGAACGAGAATGAAAATGTCGGTGTATCTCCACCAAATGCAACTACGAAAGGTCAAAACGATAGGAAGCA
AAAAGGTAATGTTGATGGTCCTCATGTCGAGTGCAAAAAATGTGGTGCTTTATATACTAGT
Protein sequenceShow/hide protein sequence
MNAPCGDEVEVEVANENENVGVSPPNATTKGQNDRKQKGNVDGPHVECKKCGALYTS