; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016544 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016544
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNon-specific lipid-transfer protein
Genome locationscaffold1294:13642..13989
RNA-Seq ExpressionMS016544
SyntenyMS016544
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0090378 - seed trichome elongation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157263.1 non-specific lipid-transfer protein 1-like [Momordica charantia]4.4e-3472.03Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG-GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGK
        MEMSRKMMIVA M M+ +VVG    DA ISCG+VS A+APCI YLR  G +   CCSGVK LNSQASTTADRQA C+CLK+AA AIPG+NLGLAAGLP  
Subjt:  MEMSRKMMIVAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG-GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGK

Query:  CGVSVPYKISPSTDCSKV
        CGV++PYKISPSTDC++V
Subjt:  CGVSVPYKISPSTDCSKV

XP_022157264.1 non-specific lipid-transfer protein 1-like [Momordica charantia]5.8e-5094.78Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVS
        MEMSRKMMIVAGMVMMWMVVG AAISCGSV+GAVAPCISYLR GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI GI+LG AAGLPGKCGVS
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVS

Query:  VPYKISPSTDCSKVH
        VPYKISPSTDCSKVH
Subjt:  VPYKISPSTDCSKVH

XP_022935125.1 non-specific lipid-transfer protein 1-like [Cucurbita moschata]3.0e-3062.07Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR--GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        ME S KM I+ G+V+M MVVG+AAISCG+V+ +V+PCISYL+     +  ACC+G+++LNSQAST+ DR+  C CLKSAA +I GIN   A+ LP KCGV
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR--GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKVH
        S+PYKISPSTDCSKV+
Subjt:  SVPYKISPSTDCSKVH

XP_022982607.1 non-specific lipid-transfer protein 1-like [Cucurbita maxima]2.7e-3164.66Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGV--LSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        ME S KM IV G+V+M MVVG+AAISCG+V+ +VAPCI YLR     L  ACCSG+++LNSQAST+ADR+  C CLKSAA ++ GIN   A+ LP KCGV
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGV--LSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKVH
        S+PYKISPSTDC+KV+
Subjt:  SVPYKISPSTDCSKVH

XP_038902996.1 non-specific lipid-transfer protein 1-like [Benincasa hispida]3.7e-3365.52Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRG--GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        ME S K+M++ G+VMM MVV +AAISCG+V+GAV PCI YL+   G+  PACC+GV+NL SQAST ADR+A C CLK+AA +I GI++G AAGLP KCGV
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRG--GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKVH
        S+PYKISP+TDC+KV+
Subjt:  SVPYKISPSTDCSKVH

TrEMBL top hitse value%identityAlignment
A0A1R3KLW1 Non-specific lipid-transfer protein3.2e-3066.34Show/hide
Query:  MVMMWMVVGDAAISCGSVSGAVAPCISYLRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSK
        M ++   + + AI+CG V+ ++A CI+YLRGG L+P CC+GV++LNS A TT DRQA C CLKSAAG+IPGIN GLA GLPGKC VS+PYKISPSTDCSK
Subjt:  MVMMWMVVGDAAISCGSVSGAVAPCISYLRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSK

Query:  V
        V
Subjt:  V

A0A6J1DSX2 Non-specific lipid-transfer protein2.1e-3472.03Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG-GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGK
        MEMSRKMMIVA M M+ +VVG    DA ISCG+VS A+APCI YLR  G +   CCSGVK LNSQASTTADRQA C+CLK+AA AIPG+NLGLAAGLP  
Subjt:  MEMSRKMMIVAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG-GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGK

Query:  CGVSVPYKISPSTDCSKV
        CGV++PYKISPSTDC++V
Subjt:  CGVSVPYKISPSTDCSKV

A0A6J1DW01 Non-specific lipid-transfer protein2.8e-5094.78Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVS
        MEMSRKMMIVAGMVMMWMVVG AAISCGSV+GAVAPCISYLR GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI GI+LG AAGLPGKCGVS
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVS

Query:  VPYKISPSTDCSKVH
        VPYKISPSTDCSKVH
Subjt:  VPYKISPSTDCSKVH

A0A6J1F9Q5 Non-specific lipid-transfer protein1.4e-3062.07Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR--GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        ME S KM I+ G+V+M MVVG+AAISCG+V+ +V+PCISYL+     +  ACC+G+++LNSQAST+ DR+  C CLKSAA +I GIN   A+ LP KCGV
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLR--GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKVH
        S+PYKISPSTDCSKV+
Subjt:  SVPYKISPSTDCSKVH

A0A6J1IX25 Non-specific lipid-transfer protein1.3e-3164.66Show/hide
Query:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGV--LSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        ME S KM IV G+V+M MVVG+AAISCG+V+ +VAPCI YLR     L  ACCSG+++LNSQAST+ADR+  C CLKSAA ++ GIN   A+ LP KCGV
Subjt:  MEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGV--LSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKVH
        S+PYKISPSTDC+KV+
Subjt:  SVPYKISPSTDCSKVH

SwissProt top hitse value%identityAlignment
P85894 Non-specific lipid-transfer protein 14.5e-2970Show/hide
Query:  ISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV
        I+CG VS ++APCI+YLR GGV+   CC+GV++LN+ A TTADRQA C CLKSA  +I G+NL LAAGLPGKCGVSVPYKISPSTDC  V
Subjt:  ISCGSVSGAVAPCISYLR-GGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV

Q39950 Non-specific lipid-transfer protein4.0e-3062.61Show/hide
Query:  MSRKMMIVAGMVMMWMVVG---DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV
        M++  M+V    +  MVVG     A+SCG VS ++APCISYL +GG + PACCSGVK+LNS A TT DRQA C CLKSA  +I G+N G AA  PGKCGV
Subjt:  MSRKMMIVAGMVMMWMVVG---DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGV

Query:  SVPYKISPSTDCSKV
        S+PYKISPSTDCSKV
Subjt:  SVPYKISPSTDCSKV

Q42762 Non-specific lipid-transfer protein2.9e-2857.66Show/hide
Query:  VAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG---GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPY
        +A +V++ MVVG      A++ G V+ ++APCI+YLRG   G + P CC+G+K+LNS A TT  RQA C+C+KSAA  I GIN GLA+GLPGKCGV++PY
Subjt:  VAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG---GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPY

Query:  KISPSTDCSKV
        KISPSTDC+ V
Subjt:  KISPSTDCSKV

Q43129 Non-specific lipid-transfer protein2.9e-2857.66Show/hide
Query:  VAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG---GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPY
        +A +V++ MVVG      A++ G V+ ++APCI+YLRG   G + P CC+G+K+LNS A TT  RQA C+C+KSAA  I GIN GLA+GLPGKCGV++PY
Subjt:  VAGMVMMWMVVG----DAAISCGSVSGAVAPCISYLRG---GVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPY

Query:  KISPSTDCSKV
        KISPSTDC+ V
Subjt:  KISPSTDCSKV

Q43766 Non-specific lipid-transfer protein 39.9e-2959.46Show/hide
Query:  KMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGVLSP--ACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYK
        ++++VA +  M +V  DAAISCG VS A++PCISY RG    P  ACCSGVK L   A +TAD+QA C+CLKS A +I GIN+G  +G+PGKCGVSVP+ 
Subjt:  KMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGVLSP--ACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYK

Query:  ISPSTDCSKVH
        IS STDC+KVH
Subjt:  ISPSTDCSKVH

Arabidopsis top hitse value%identityAlignment
AT2G38530.1 lipid transfer protein 22.2e-2350.44Show/hide
Query:  MSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI-PGINLGLAAGLPGKCGVSV
        M    M++A M++   +  +A +SCG+V+G +A CI+YL RG  L+  CC+GV NL + ASTT DRQ  C+CL+SAA A+ PG+N   AAGLP  C V++
Subjt:  MSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI-PGINLGLAAGLPGKCGVSV

Query:  PYKISPSTDCSKV
        PYKIS ST+C+ V
Subjt:  PYKISPSTDCSKV

AT2G38540.1 lipid transfer protein 11.4e-2553.1Show/hide
Query:  MSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISY-LRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI-PGINLGLAAGLPGKCGVSV
        M    +++A M++   +  +AA+SCGSV+  +A CI Y L+GGV+ PACCSGVKNLNS A TT DRQ  C C++ AA A+  G+N G AAG+P  CGV++
Subjt:  MSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISY-LRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI-PGINLGLAAGLPGKCGVSV

Query:  PYKISPSTDCSKV
        PYKIS ST+C  V
Subjt:  PYKISPSTDCSKV

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein8.6e-2046.32Show/hide
Query:  DAAISCGSVSGAVAPCISY-LRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI--PGINLGLAAGLPGKCGVSVPYKISPSTDCSKV
        +AAISC +V   + PC+ Y ++GG +  +CC+G++ L+ QA++ +D+Q VC+C+KS  G +    I L  AA LPGKCGV +PYKI PST+C+ +
Subjt:  DAAISCGSVSGAVAPCISY-LRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAI--PGINLGLAAGLPGKCGVSVPYKISPSTDCSKV

AT5G59310.1 lipid transfer protein 41.4e-2558.06Show/hide
Query:  DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV
        DAAI+CG+V+ +++PC+ YL +GGV+ P CC+GVK LN  A TT DRQ  C+CL+SAA    G+N  LA+GLPGKCGVS+PY IS ST+C+ +
Subjt:  DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV

AT5G59320.1 lipid transfer protein 33.9e-2860.22Show/hide
Query:  DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV
        DAAISCG+V+G++APC +YL +GG++ P+CC+GVK LNS A TT DRQ  C+C++S A +I G+N  LA+GLPGKCGVS+PY IS ST+C+ +
Subjt:  DAAISCGSVSGAVAPCISYL-RGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPSTDCSKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAAGAATGGAGATGAGCAGGAAGATGATGATTGTGGCGGGTATGGTAATGATGTGGATGGTGGTGGGCGATGCGGCTATTTCGTGCGGCTCGGTGAGCGGCGCAGTGGC
GCCGTGCATCTCATACTTGAGAGGAGGGGTTCTTTCGCCAGCGTGCTGCAGCGGGGTTAAGAACCTCAACAGCCAGGCTTCTACCACGGCCGACCGTCAGGCCGTCTGCC
AGTGCTTGAAGAGTGCGGCTGGCGCCATCCCAGGAATCAACTTGGGCCTCGCCGCCGGCCTCCCCGGTAAATGCGGCGTCAGCGTTCCCTACAAGATCAGCCCCAGTACC
GACTGCTCCAAAGTTCAC
mRNA sequenceShow/hide mRNA sequence
AGAAGAATGGAGATGAGCAGGAAGATGATGATTGTGGCGGGTATGGTAATGATGTGGATGGTGGTGGGCGATGCGGCTATTTCGTGCGGCTCGGTGAGCGGCGCAGTGGC
GCCGTGCATCTCATACTTGAGAGGAGGGGTTCTTTCGCCAGCGTGCTGCAGCGGGGTTAAGAACCTCAACAGCCAGGCTTCTACCACGGCCGACCGTCAGGCCGTCTGCC
AGTGCTTGAAGAGTGCGGCTGGCGCCATCCCAGGAATCAACTTGGGCCTCGCCGCCGGCCTCCCCGGTAAATGCGGCGTCAGCGTTCCCTACAAGATCAGCCCCAGTACC
GACTGCTCCAAAGTTCAC
Protein sequenceShow/hide protein sequence
RRMEMSRKMMIVAGMVMMWMVVGDAAISCGSVSGAVAPCISYLRGGVLSPACCSGVKNLNSQASTTADRQAVCQCLKSAAGAIPGINLGLAAGLPGKCGVSVPYKISPST
DCSKVH