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MS016545 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016545
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNon-specific lipid-transfer protein
Genome locationscaffold1294:17561..17914
RNA-Seq ExpressionMS016545
SyntenyMS016545
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010143 - cutin biosynthetic process (biological process)
GO:0044403 - symbiotic process (biological process)
GO:0090378 - seed trichome elongation (biological process)
GO:0090379 - secondary cell wall biogenesis involved in seed trichome differentiation (biological process)
GO:0008134 - transcription factor binding (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFR43276.1 lipid transfer protein precursor [Gossypium herbaceum subsp. africanum]5.1e-3058.33Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCCSG+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

TYJ15160.1 hypothetical protein E1A91_A10G166300v1 [Gossypium mustelinum]2.0e-2957.5Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +    ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCC+G+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

XP_016677580.2 non-specific lipid-transfer protein-like isoform X2 [Gossypium hirsutum]8.8e-3058.33Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCCSG+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

XP_022157263.1 non-specific lipid-transfer protein 1-like [Momordica charantia]4.6e-5599.15Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
        MEMSRKMMIVAMAMVLLVVGSPVADAVI CGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
        GVNIPYKISPSTDCAQVR
Subjt:  GVNIPYKISPSTDCAQVR

XP_022157264.1 non-specific lipid-transfer protein 1-like [Momordica charantia]7.9e-3166.95Show/hide
Query:  MEMSRKMMIVA-MAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSH
        MEMSRKMMIVA M M+ +VVG     A I CG+V+ A+APCI YLR  G +   CCSGVK LNSQASTTADRQA C+CLK+AA AI G++LG AAGLP  
Subjt:  MEMSRKMMIVA-MAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSH

Query:  CGVNIPYKISPSTDCAQV
        CGV++PYKISPSTDC++V
Subjt:  CGVNIPYKISPSTDCAQV

TrEMBL top hitse value%identityAlignment
A0A5D2NRE5 Non-specific lipid-transfer protein2.5e-3058.33Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCCSG+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

A0A6J1DSX2 Non-specific lipid-transfer protein2.2e-5599.15Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
        MEMSRKMMIVAMAMVLLVVGSPVADAVI CGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
        GVNIPYKISPSTDCAQVR
Subjt:  GVNIPYKISPSTDCAQVR

A0A6J1DW01 Non-specific lipid-transfer protein3.8e-3166.95Show/hide
Query:  MEMSRKMMIVA-MAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSH
        MEMSRKMMIVA M M+ +VVG     A I CG+V+ A+APCI YLR  G +   CCSGVK LNSQASTTADRQA C+CLK+AA AI G++LG AAGLP  
Subjt:  MEMSRKMMIVA-MAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSH

Query:  CGVNIPYKISPSTDCAQV
        CGV++PYKISPSTDC++V
Subjt:  CGVNIPYKISPSTDCAQV

U5HU07 Non-specific lipid-transfer protein2.5e-3058.33Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCCSG+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

U5HU82 Non-specific lipid-transfer protein2.5e-3058.33Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   + CG V+S++APCI YLR    G I  GCCSG+K+LNS A TT DRQAACKC+K+AAA IPG+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLR--NQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC+ V+
Subjt:  HCGVNIPYKISPSTDCAQVR

SwissProt top hitse value%identityAlignment
O24038 Non-specific lipid-transfer protein 25.9e-2958.47Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
        MEM  K  I    ++ +VV +P A+A + CG V+S +APC+PYL N+GP+G GCC GVK L  QA TT DRQ AC CLK+AA++  GL+LG AA LPS C
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
         VNIPYKISPSTDC++V+
Subjt:  GVNIPYKISPSTDCAQVR

P85894 Non-specific lipid-transfer protein 16.5e-2865.93Show/hide
Query:  IPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR
        I CG VSS++APCI YLR  G + A CC+GV++LN+ A TTADRQAAC CLK+A  +I GLNL LAAGLP  CGV++PYKISPSTDC  V+
Subjt:  IPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQVR

Q3YMR2 Non-specific lipid-transfer protein 21.3e-2858.47Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
        MEM  K  I    ++ +VV +P A+A + CG V+S +APC+PYL N+GP+G GCC GVK L  QA TT DRQAAC CLK+AA++   L+LG AA LPS C
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
         VNIPYKISPSTDC++V+
Subjt:  GVNIPYKISPSTDCAQVR

Q42952 Non-specific lipid-transfer protein 17.0e-3061.02Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC
        ME++ K  I    ++ +VV +P A+A I CG V+S +APC+ YLRN GP+G  CC GVKAL + A TT DRQ AC CLK+AA AI G+NLG AAGLPS C
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
        GVNIPYKISPSTDC++V+
Subjt:  GVNIPYKISPSTDCAQVR

Q43129 Non-specific lipid-transfer protein2.2e-2852.5Show/hide
Query:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQ--GPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS
        M  S  + +  + ++ +VVG+P+A   +  G V++++APCI YLR    G +  GCC+G+K+LNS A TT  RQAAC+C+K+AAA I G+N GLA+GLP 
Subjt:  MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQ--GPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPS

Query:  HCGVNIPYKISPSTDCAQVR
         CGVNIPYKISPSTDC  V+
Subjt:  HCGVNIPYKISPSTDCAQVR

Arabidopsis top hitse value%identityAlignment
AT2G38530.1 lipid transfer protein 22.6e-2450.85Show/hide
Query:  MSRKMMIVAMAMVLLVVGSPV-ADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHC
        M+  M +  M +  ++V  P+ A+A++ CG V+  +A CI YL    P+  GCC+GV  L + ASTT DRQ AC+CL++AA A+ PGLN   AAGLPS C
Subjt:  MSRKMMIVAMAMVLLVVGSPV-ADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
         VNIPYKIS ST+C  VR
Subjt:  GVNIPYKISPSTDCAQVR

AT2G38540.1 lipid transfer protein 12.9e-2350Show/hide
Query:  MSRKMMIVAMAMVLLVVGSPV-ADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHC
        M+  M +  + +  ++V  P+ ++A + CG+V+S +A CI Y+   G I   CCSGVK LNS A TT DRQ AC C++ AA A+  GLN G AAG+P  C
Subjt:  MSRKMMIVAMAMVLLVVGSPV-ADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAI-PGLNLGLAAGLPSHC

Query:  GVNIPYKISPSTDCAQVR
        GVNIPYKIS ST+C  VR
Subjt:  GVNIPYKISPSTDCAQVR

AT3G51590.1 lipid transfer protein 121.4e-2045.87Show/hide
Query:  IVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKI
        I+   +VL +  +   ++ I CG V+S +A C+ YL N GP+ + CC GVK+L   A TT DR+  C+CLK A   I GLN  L A LP+ CGV+IPY I
Subjt:  IVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKI

Query:  SPSTDCAQV
        S ST+C  +
Subjt:  SPSTDCAQV

AT5G59310.1 lipid transfer protein 47.2e-2250.96Show/hide
Query:  VLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDC
        VL V      DA I CG V+S+++PC+ YL   G +   CC+GVK LN  A TT DRQ AC+CL++AA    G+N  LA+GLP  CGV+IPY IS ST+C
Subjt:  VLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDC

Query:  AQVR
        A ++
Subjt:  AQVR

AT5G59320.1 lipid transfer protein 32.9e-2350.48Show/hide
Query:  MVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTD
        +VL V      DA I CG V+ ++APC  YL   G +   CC+GVK LNS A TT DRQ AC+C+++ A +I GLN  LA+GLP  CGV+IPY IS ST+
Subjt:  MVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTD

Query:  CAQVR
        C  ++
Subjt:  CAQVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAGCAGGAAGATGATGATTGTGGCGATGGCGATGGTGTTGTTGGTGGTGGGGTCTCCGGTGGCTGATGCGGTTATTCCGTGCGGCGCCGTGAGCAGCGCAAT
GGCGCCGTGCATCCCATACTTGAGGAACCAAGGGCCTATTGGGGCGGGTTGCTGCAGCGGGGTTAAGGCCCTCAACAGCCAAGCTTCTACCACGGCCGACCGTCAGGCCG
CTTGTAAATGCTTGAAGACTGCCGCTGCCGCCATCCCTGGACTGAACTTGGGCCTCGCCGCTGGCCTCCCCTCTCATTGTGGCGTCAACATTCCATACAAGATCAGCCCC
AGCACTGACTGCGCCCAAGTTCGC
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGAGCAGGAAGATGATGATTGTGGCGATGGCGATGGTGTTGTTGGTGGTGGGGTCTCCGGTGGCTGATGCGGTTATTCCGTGCGGCGCCGTGAGCAGCGCAAT
GGCGCCGTGCATCCCATACTTGAGGAACCAAGGGCCTATTGGGGCGGGTTGCTGCAGCGGGGTTAAGGCCCTCAACAGCCAAGCTTCTACCACGGCCGACCGTCAGGCCG
CTTGTAAATGCTTGAAGACTGCCGCTGCCGCCATCCCTGGACTGAACTTGGGCCTCGCCGCTGGCCTCCCCTCTCATTGTGGCGTCAACATTCCATACAAGATCAGCCCC
AGCACTGACTGCGCCCAAGTTCGC
Protein sequenceShow/hide protein sequence
MEMSRKMMIVAMAMVLLVVGSPVADAVIPCGAVSSAMAPCIPYLRNQGPIGAGCCSGVKALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISP
STDCAQVR