; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016546 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016546
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationscaffold1294:22027..22602
RNA-Seq ExpressionMS016546
SyntenyMS016546
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8099021.1 hypothetical protein FH972_017037 [Carpinus fangiana]5.2e-4856.48Show/hide
Query:  RRLLAT-ELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS--------QSPEGAAAATGLKKRDLGQIPVGVFGIGGG
        RRLL T +L   P   NRT DS+Y+ E N D NMV+ILAAL CALI ALG+NSIVRC LRCS        +      AATGLKKRDL QIPV ++G G  
Subjt:  RRLLAT-ELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS--------QSPEGAAAATGLKKRDLGQIPVGVFGIGGG

Query:  DGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKV----KEIAAVSQPPPASASTQAHVVLLL
             VNIK T+C ICLGEF+ G+K+R+LP CNHGFHVRCIDTWLLSHSSCPNCRHSLL  P       +++         SA+TQ+ VV+++
Subjt:  DGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKV----KEIAAVSQPPPASASTQAHVVLLL

XP_022157309.1 RING-H2 finger protein ATL74-like [Momordica charantia]1.4e-10198.95Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG
        MEQNL RRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGV+GIGGGDGG
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG

Query:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS
        NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS
Subjt:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS

XP_022930638.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]3.7e-5462.81Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL----RCSQSPEGAA---AATGLKKRDLGQIPVGVF
        M+ NL RRLLATE    P   N T +S+ YVGEMNLDA+MVVILAAL  ALIGALG+NS+VRCVL    R  + PE  A   AA GLKKR+L QIPVGV+
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL----RCSQSPEGAA---AATGLKKRDLGQIPVGVF

Query:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQP--PPASASTQAHVVLLLQSG
              G +   IKGTDCAICLGEF+ GDK+RMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   A   P  PP   S  +HVV++++ G
Subjt:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQP--PPASASTQAHVVLLLQSG

XP_022971293.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]1.4e-5361.31Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGVF
        M+ NL RRLLATE     + AN    S YVGEMNLDA+MVVILAAL  ALIGALG+N++VRCVL      R  +  E AA  AA GLKKR+L QIPVGV+
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGVF

Query:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKE--IAAVSQPPPASASTQAHVVLLLQSG
              G +   IKGTDCAICLGEF+ GDK+RMLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   +     PPP   S  +HVV++++ G
Subjt:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKE--IAAVSQPPPASASTQAHVVLLLQSG

XP_023540727.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.7e-5463.64Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGV
        M+ NL RRLLATE    P   N T +S+ YVGEMNLDA+MVVILAAL  ALIGALG+NS+VRCVL      R  +  E AA  AA GLKKR+L QIPVGV
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGV

Query:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSG
        +      G +   IKGTDCAICLGEF+ GDK+RMLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   A   PP  SAS  +HVV++++ G
Subjt:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSG

TrEMBL top hitse value%identityAlignment
A0A1R3JHP3 Zinc finger, RING-type4.8e-4757.36Show/hide
Query:  LTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS-----QSPEGAA---AATGLKKRDLGQIPVGVFGIGG
        + RRLL TE+   P   N+T DS Y+ E N D NMV+ILAAL CALI ALG+NSIVRC LRCS     ++PE AA   AATGLKKR+L QIPV V+G GG
Subjt:  LTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS-----QSPEGAA---AATGLKKRDLGQIPVGVFGIGG

Query:  GDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL--HPPLKVKEIAAVS-QPPPASASTQAHVVLLLQSGS
              V+   T+C ICLGEF  G+K+R+LP CNHGFHVRCIDTWL+SHSSCPNCRHSLL  H P K +     S + PP S      VV+++Q  S
Subjt:  GDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL--HPPLKVKEIAAVS-QPPPASASTQAHVVLLLQSGS

A0A5N6RI02 RING-type domain-containing protein2.5e-4856.48Show/hide
Query:  RRLLAT-ELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS--------QSPEGAAAATGLKKRDLGQIPVGVFGIGGG
        RRLL T +L   P   NRT DS+Y+ E N D NMV+ILAAL CALI ALG+NSIVRC LRCS        +      AATGLKKRDL QIPV ++G G  
Subjt:  RRLLAT-ELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCS--------QSPEGAAAATGLKKRDLGQIPVGVFGIGGG

Query:  DGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKV----KEIAAVSQPPPASASTQAHVVLLL
             VNIK T+C ICLGEF+ G+K+R+LP CNHGFHVRCIDTWLLSHSSCPNCRHSLL  P       +++         SA+TQ+ VV+++
Subjt:  DGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKV----KEIAAVSQPPPASASTQAHVVLLL

A0A6J1DW47 RING-H2 finger protein ATL74-like6.8e-10298.95Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG
        MEQNL RRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGV+GIGGGDGG
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG

Query:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS
        NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS
Subjt:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS

A0A6J1EVU3 RING-H2 finger protein ATL74-like1.8e-5462.81Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL----RCSQSPEGAA---AATGLKKRDLGQIPVGVF
        M+ NL RRLLATE    P   N T +S+ YVGEMNLDA+MVVILAAL  ALIGALG+NS+VRCVL    R  + PE  A   AA GLKKR+L QIPVGV+
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSA-YVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL----RCSQSPEGAA---AATGLKKRDLGQIPVGVF

Query:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQP--PPASASTQAHVVLLLQSG
              G +   IKGTDCAICLGEF+ GDK+RMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   A   P  PP   S  +HVV++++ G
Subjt:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQP--PPASASTQAHVVLLLQSG

A0A6J1I6E6 RING-H2 finger protein ATL74-like6.9e-5461.31Show/hide
Query:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGVF
        M+ NL RRLLATE     + AN    S YVGEMNLDA+MVVILAAL  ALIGALG+N++VRCVL      R  +  E AA  AA GLKKR+L QIPVGV+
Subjt:  MEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVL------RCSQSPEGAA--AATGLKKRDLGQIPVGVF

Query:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKE--IAAVSQPPPASASTQAHVVLLLQSG
              G +   IKGTDCAICLGEF+ GDK+RMLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   +     PPP   S  +HVV++++ G
Subjt:  GIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKE--IAAVSQPPPASASTQAHVVLLLQSG

SwissProt top hitse value%identityAlignment
Q6NQG7 RING-H2 finger protein ATL783.9e-3038.78Show/hide
Query:  VMEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA---------TGLKKRDLGQIPVG
        ++  + +R+LL      +P+ A     S YVG+ N DAN+V++L+ L CAL+ +LG+NSI+RC LRCS      A           TG+K++ L      
Subjt:  VMEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA---------TGLKKRDLGQIPVG

Query:  VFGIGGGDGGNMVNIKG--TDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVS-----QPPPASASTQ
         +          +N+ G  T+CAICL EF   +++++LP C+HGFHVRCID WL SHSSCP CRH L+    K+ + +  S     QPP  S   Q
Subjt:  VFGIGGGDGGNMVNIKG--TDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVS-----QPPPASASTQ

Q9FLC6 RING-H2 finger protein ATL738.4e-3347.59Show/hide
Query:  LTRRLLATE----LGNTPSEANRTGDSAYVGE--MNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQS--------PEGAAAATGLKKRDLGQIPVG
        + R LLAT+    +  T +     GDS    +   ++D +MV+ILAAL CALI ALG+NS++RCVLRC++            A  A G+KKR L  IPV 
Subjt:  LTRRLLATE----LGNTPSEANRTGDSAYVGE--MNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQS--------PEGAAAATGLKKRDLGQIPVG

Query:  VFGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
         +          + +K T+C ICLG+F  G+ +R+LP CNHGFHV+CIDTWLLSHSSCP CR SLL
Subjt:  VFGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL

Q9LM69 RING-H2 finger protein ATL805.5e-2446.15Show/hide
Query:  NTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCV-LR--------------CSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG
        NTPS A     +A      L++++VVILAAL CALI  LG+ ++ RCV LR               S  P  AAA  GLKK+ L  +P   F     +  
Subjt:  NTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCV-LR--------------CSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG

Query:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
           + K  +CAICL EF  GD+LR+LP C HGFHV CIDTWL SHSSCP+CR  L+
Subjt:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL

Q9LZV8 RING-H2 finger protein ATL743.5e-3953.55Show/hide
Query:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA------TGLKKRDLGQIPVGVFGIGGGDGGN
        RLL    G     +   G   Y  +MN DANMV+ILAAL CALI ALG+NSI+RC +RC      +AAA       GLKKR+L + PV  +G G      
Subjt:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA------TGLKKRDLGQIPVGVFGIGGGDGGN

Query:  MVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
         V I  T+CAICLGEF  G+++R+LP CNH FH+ CIDTWL+SHSSCPNCRHSL+
Subjt:  MVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL

Q9SG96 RING-H2 finger protein ATL724.8e-3647.85Show/hide
Query:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQ-----------SPEGA-----AAATGLKKRDLGQIPVGV
        RLL     N P+ AN       + +   D NMV+ILAAL CALI AL +NS +RCVLR ++           S   A     AAATGLKK+ L QIPVG+
Subjt:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQ-----------SPEGA-----AAATGLKKRDLGQIPVGV

Query:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASAS
        +G G      ++++K T+C ICLG+F+ G+K+R+LP CNHGFHVRCIDTWLLS SSCP CR SLL           + QP P + S
Subjt:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASAS

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein3.9e-2546.15Show/hide
Query:  NTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCV-LR--------------CSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG
        NTPS A     +A      L++++VVILAAL CALI  LG+ ++ RCV LR               S  P  AAA  GLKK+ L  +P   F     +  
Subjt:  NTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCV-LR--------------CSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGG

Query:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
           + K  +CAICL EF  GD+LR+LP C HGFHV CIDTWL SHSSCP+CR  L+
Subjt:  NMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL

AT1G49230.1 RING/U-box superfamily protein2.8e-3138.78Show/hide
Query:  VMEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA---------TGLKKRDLGQIPVG
        ++  + +R+LL      +P+ A     S YVG+ N DAN+V++L+ L CAL+ +LG+NSI+RC LRCS      A           TG+K++ L      
Subjt:  VMEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA---------TGLKKRDLGQIPVG

Query:  VFGIGGGDGGNMVNIKG--TDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVS-----QPPPASASTQ
         +          +N+ G  T+CAICL EF   +++++LP C+HGFHVRCID WL SHSSCP CRH L+    K+ + +  S     QPP  S   Q
Subjt:  VFGIGGGDGGNMVNIKG--TDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVS-----QPPPASASTQ

AT3G10910.1 RING/U-box superfamily protein3.4e-3747.85Show/hide
Query:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQ-----------SPEGA-----AAATGLKKRDLGQIPVGV
        RLL     N P+ AN       + +   D NMV+ILAAL CALI AL +NS +RCVLR ++           S   A     AAATGLKK+ L QIPVG+
Subjt:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQ-----------SPEGA-----AAATGLKKRDLGQIPVGV

Query:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASAS
        +G G      ++++K T+C ICLG+F+ G+K+R+LP CNHGFHVRCIDTWLLS SSCP CR SLL           + QP P + S
Subjt:  FGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASAS

AT5G01880.1 RING/U-box superfamily protein2.5e-4053.55Show/hide
Query:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA------TGLKKRDLGQIPVGVFGIGGGDGGN
        RLL    G     +   G   Y  +MN DANMV+ILAAL CALI ALG+NSI+RC +RC      +AAA       GLKKR+L + PV  +G G      
Subjt:  RLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAA------TGLKKRDLGQIPVGVFGIGGGDGGN

Query:  MVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
         V I  T+CAICLGEF  G+++R+LP CNH FH+ CIDTWL+SHSSCPNCRHSL+
Subjt:  MVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL

AT5G05280.1 RING/U-box superfamily protein6.0e-3447.59Show/hide
Query:  LTRRLLATE----LGNTPSEANRTGDSAYVGE--MNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQS--------PEGAAAATGLKKRDLGQIPVG
        + R LLAT+    +  T +     GDS    +   ++D +MV+ILAAL CALI ALG+NS++RCVLRC++            A  A G+KKR L  IPV 
Subjt:  LTRRLLATE----LGNTPSEANRTGDSAYVGE--MNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQS--------PEGAAAATGLKKRDLGQIPVG

Query:  VFGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL
         +          + +K T+C ICLG+F  G+ +R+LP CNHGFHV+CIDTWLLSHSSCP CR SLL
Subjt:  VFGIGGGDGGNMVNIKGTDCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGTTATGGAACAAAATTTGACACGCCGGCTTCTGGCGACAGAGCTAGGGAACACCCCATCGGAGGCGAACCGTACGGGTGATTCAGCTTATGTTGGAGAGATGAATTT
GGATGCCAACATGGTGGTAATACTTGCGGCTTTATCATGTGCGCTAATTGGAGCGCTCGGAATGAACTCTATTGTACGCTGCGTTTTGAGATGTAGCCAGAGTCCGGAGG
GGGCCGCAGCGGCCACCGGCCTCAAGAAGCGAGATTTGGGTCAAATTCCGGTGGGGGTTTTCGGAATCGGAGGCGGTGACGGTGGCAATATGGTCAATATTAAGGGCACG
GATTGCGCAATTTGCCTCGGGGAATTCCAACCGGGCGACAAGCTCAGAATGCTGCCCGTTTGCAACCATGGATTCCACGTCAGATGCATTGACACGTGGCTGCTGTCCCA
CTCCTCCTGCCCCAACTGTCGCCATTCCCTACTGCACCCGCCGCTTAAAGTCAAAGAAATCGCCGCCGTTTCGCAGCCCCCGCCGGCTTCTGCATCAACCCAAGCCCATG
TCGTTCTGCTCCTACAGAGTGGCAGT
mRNA sequenceShow/hide mRNA sequence
TTAGTTATGGAACAAAATTTGACACGCCGGCTTCTGGCGACAGAGCTAGGGAACACCCCATCGGAGGCGAACCGTACGGGTGATTCAGCTTATGTTGGAGAGATGAATTT
GGATGCCAACATGGTGGTAATACTTGCGGCTTTATCATGTGCGCTAATTGGAGCGCTCGGAATGAACTCTATTGTACGCTGCGTTTTGAGATGTAGCCAGAGTCCGGAGG
GGGCCGCAGCGGCCACCGGCCTCAAGAAGCGAGATTTGGGTCAAATTCCGGTGGGGGTTTTCGGAATCGGAGGCGGTGACGGTGGCAATATGGTCAATATTAAGGGCACG
GATTGCGCAATTTGCCTCGGGGAATTCCAACCGGGCGACAAGCTCAGAATGCTGCCCGTTTGCAACCATGGATTCCACGTCAGATGCATTGACACGTGGCTGCTGTCCCA
CTCCTCCTGCCCCAACTGTCGCCATTCCCTACTGCACCCGCCGCTTAAAGTCAAAGAAATCGCCGCCGTTTCGCAGCCCCCGCCGGCTTCTGCATCAACCCAAGCCCATG
TCGTTCTGCTCCTACAGAGTGGCAGT
Protein sequenceShow/hide protein sequence
LVMEQNLTRRLLATELGNTPSEANRTGDSAYVGEMNLDANMVVILAALSCALIGALGMNSIVRCVLRCSQSPEGAAAATGLKKRDLGQIPVGVFGIGGGDGGNMVNIKGT
DCAICLGEFQPGDKLRMLPVCNHGFHVRCIDTWLLSHSSCPNCRHSLLHPPLKVKEIAAVSQPPPASASTQAHVVLLLQSGS