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MS016552 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016552
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeukocyte immunoglobulin-like receptor subfamily A member
Genome locationscaffold1294:47431..47784
RNA-Seq ExpressionMS016552
SyntenyMS016552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF33679.1 conserved hypothetical protein [Ricinus communis]6.5e-1749.19Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQ-DQPRK--ATFNFNKIINKLLKPILHRKSRARATA---
        V+K FGD+ S LLDQ+ER+SFE +L +AMLGRSLSEP   RS+ Q      A  PP   + Q  Q R+   +  FN+++ KLLKPI  RK   +  A   
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQ-DQPRK--ATFNFNKIINKLLKPILHRKSRARATA---

Query:  --KKEFPDFKNPMSWKALSKSMRL
          K+E PD KN  SWKALS+S+RL
Subjt:  --KKEFPDFKNPMSWKALSKSMRL

GFY82440.1 hypothetical protein Acr_02g0006800 [Actinidia rufa]2.9e-1748.74Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKKE
        ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P      Q +P   R A   F K++  LLKPIL R    R   +KE
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKKE

Query:  FPDFKNPMSWKALSKSMRL
         PD K+P  WK+ S+SMR+
Subjt:  FPDFKNPMSWKALSKSMRL

KAB5561808.1 hypothetical protein DKX38_006765 [Salix brachista]5.0e-1747.97Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR------ARATA
        V+K+FGDE S LLDQ+ER+SFE +L +AMLGRSLSEP   RSQ        +   P   + +   R+    F+K + KLLKPIL RK R        A A
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR------ARATA

Query:  KKE-FPDFKNPMSWKALSKSMRL
        KKE   D K+P SWKA S+S+R+
Subjt:  KKE-FPDFKNPMSWKALSKSMRL

KAG6580428.1 hypothetical protein SDJN03_20430, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3469.84Show/hide
Query:  MAVVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRS----QPQLLTASVAVGPPYNYRYQDQPRK----ATFNFNKIINKLLKPILHRKSRA
        MAVVKKFGDEHSNLLDQYER SFEARL +A+LGRSLSEPRT+RS    QPQL  +     P       +QPRK    +TFNFNKIINKLLKPIL RKS++
Subjt:  MAVVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRS----QPQLLTASVAVGPPYNYRYQDQPRK----ATFNFNKIINKLLKPILHRKSRA

Query:  RATAKKEFPDFKNPMSWKALSKSMRL
        R  AKKE PDF+NP+SWKALSKSMRL
Subjt:  RATAKKEFPDFKNPMSWKALSKSMRL

PSS34765.1 Protein Wnt-3a like [Actinidia chinensis var. chinensis]2.9e-1748.74Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRK---ATFNFNKIINKLLKPILHRKSRARATAKKE
        ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P      Q QP +   A   F K++  LLKPIL R    R   +KE
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRK---ATFNFNKIINKLLKPILHRKSRARATAKKE

Query:  FPDFKNPMSWKALSKSMRL
         PD K+P  WK+ S+SMR+
Subjt:  FPDFKNPMSWKALSKSMRL

TrEMBL top hitse value%identityAlignment
A0A2R6RXK4 Protein Wnt-3a like1.4e-1748.74Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRK---ATFNFNKIINKLLKPILHRKSRARATAKKE
        ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P      Q QP +   A   F K++  LLKPIL R    R   +KE
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRK---ATFNFNKIINKLLKPILHRKSRARATAKKE

Query:  FPDFKNPMSWKALSKSMRL
         PD K+P  WK+ S+SMR+
Subjt:  FPDFKNPMSWKALSKSMRL

A0A5N5N485 Uncharacterized protein2.4e-1747.97Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR------ARATA
        V+K+FGDE S LLDQ+ER+SFE +L +AMLGRSLSEP   RSQ        +   P   + +   R+    F+K + KLLKPIL RK R        A A
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR------ARATA

Query:  KKE-FPDFKNPMSWKALSKSMRL
        KKE   D K+P SWKA S+S+R+
Subjt:  KKE-FPDFKNPMSWKALSKSMRL

A0A6N2K8X7 Uncharacterized protein4.1e-1745.6Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR---------AR
        V+K+FGDE S LLDQ+ER+SFE +L +AMLGRSLSEP   RSQ        +   P   + +   R+    F+K + KLLKPIL RK R         A 
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSR---------AR

Query:  ATAKKEFPDFKNPMSWKALSKSMRL
        A+ K+   D K+P SWKA S+S+R+
Subjt:  ATAKKEFPDFKNPMSWKALSKSMRL

A0A7J0E7R3 Uncharacterized protein1.4e-1748.74Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKKE
        ++K+FGDE S LLDQ+ER++FEA+L  A+LGRSLSEP + R+QP LL   +A  P      Q +P   R A   F K++  LLKPIL R    R   +KE
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQP---RKATFNFNKIINKLLKPILHRKSRARATAKKE

Query:  FPDFKNPMSWKALSKSMRL
         PD K+P  WK+ S+SMR+
Subjt:  FPDFKNPMSWKALSKSMRL

B9SRS7 Uncharacterized protein3.2e-1749.19Show/hide
Query:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQ-DQPRK--ATFNFNKIINKLLKPILHRKSRARATA---
        V+K FGD+ S LLDQ+ER+SFE +L +AMLGRSLSEP   RS+ Q      A  PP   + Q  Q R+   +  FN+++ KLLKPI  RK   +  A   
Subjt:  VVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQ-DQPRK--ATFNFNKIINKLLKPILHRKSRARATA---

Query:  --KKEFPDFKNPMSWKALSKSMRL
          K+E PD KN  SWKALS+S+RL
Subjt:  --KKEFPDFKNPMSWKALSKSMRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATATGAGAGAGTGAGCTTCGAAGCGAGACTGAAGGAAGCAATGCTGGGGCGAAGTCTTTC
GGAGCCGAGGACGATGAGGTCTCAGCCGCAACTACTTACAGCTTCAGTTGCAGTTGGACCACCATACAATTACAGATACCAGGATCAGCCCAGAAAAGCCACCTTCAACT
TCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGCACAGAAAGAGTAGGGCTAGGGCAACGGCGAAGAAGGAGTTTCCAGATTTTAAAAATCCCATGTCTTGGAAA
GCCCTCAGTAAATCCATGCGCCTT
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGTTAAGAAATTTGGGGACGAACACAGCAACTTGTTGGACCAATATGAGAGAGTGAGCTTCGAAGCGAGACTGAAGGAAGCAATGCTGGGGCGAAGTCTTTC
GGAGCCGAGGACGATGAGGTCTCAGCCGCAACTACTTACAGCTTCAGTTGCAGTTGGACCACCATACAATTACAGATACCAGGATCAGCCCAGAAAAGCCACCTTCAACT
TCAACAAGATTATCAACAAGTTACTCAAACCCATTTTGCACAGAAAGAGTAGGGCTAGGGCAACGGCGAAGAAGGAGTTTCCAGATTTTAAAAATCCCATGTCTTGGAAA
GCCCTCAGTAAATCCATGCGCCTT
Protein sequenceShow/hide protein sequence
MAVVKKFGDEHSNLLDQYERVSFEARLKEAMLGRSLSEPRTMRSQPQLLTASVAVGPPYNYRYQDQPRKATFNFNKIINKLLKPILHRKSRARATAKKEFPDFKNPMSWK
ALSKSMRL