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MS016553 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016553
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1294:48499..49111
RNA-Seq ExpressionMS016553
SyntenyMS016553
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027858.1 hypothetical protein SDJN02_09035 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4971.25Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
         VSE GNGKP  T K N TE G QSSN E CDG+ DNKKCRDQKKLVACI++N+I   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

XP_022157320.1 uncharacterized protein LOC111024051 isoform X1 [Momordica charantia]1.7e-7796.25Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
        TVSETGNGKPFVTKKNNDTEAGPQSSN ENCDGIAD KKCRDQKKLVACIKSNLI   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

XP_022157321.1 uncharacterized protein LOC111024051 isoform X2 [Momordica charantia]3.7e-7798.71Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI
        TVSETGNGKPFVTKKNNDTEAGPQSSN ENCDGIAD KKCRDQKKLVACIKSNLI
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI

XP_022941631.1 uncharacterized protein LOC111446930 [Cucurbita moschata]8.6e-5071.25Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
         VSE GNGKP  T   N TE G QSSNHE CDG+ DNKKCRDQKKLVACI++N+I   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

XP_022971211.1 uncharacterized protein LOC111470002 [Cucurbita maxima]6.6e-5071.88Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS+N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
         VSE GNGKP  T K N TE G QSSN E CDG+ DNKKCRDQKKLVACI+SN+I   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

TrEMBL top hitse value%identityAlignment
A0A6J1DSQ9 uncharacterized protein LOC111024051 isoform X18.0e-7896.25Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
        TVSETGNGKPFVTKKNNDTEAGPQSSN ENCDGIAD KKCRDQKKLVACIKSNLI   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

A0A6J1DXQ4 uncharacterized protein LOC111024051 isoform X21.8e-7798.71Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI
        TVSETGNGKPFVTKKNNDTEAGPQSSN ENCDGIAD KKCRDQKKLVACIKSNLI
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI

A0A6J1F4I5 uncharacterized protein LOC1114420925.3e-4569.23Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNG-KKHTEPPPPALNNSLSNVDSKVLSNSSSGSPP
        MAMRRD FLALF  +AVVSEVT+ASLWDSRKLL+PA  +N+T TS  SPVI+P SSVN SDS PV G KK  EPPPP+ NNS S+++S VL+NSSS S  
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNG-KKHTEPPPPALNNSLSNVDSKVLSNSSSGSPP

Query:  PTVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI
         TVSETG+GKP  TKK N TEA   SS HE CDG+ DNKKCRDQ KL+ACI+SNLI
Subjt:  PTVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLI

A0A6J1FLM5 uncharacterized protein LOC1114469304.2e-5071.25Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
         VSE GNGKP  T   N TE G QSSNHE CDG+ DNKKCRDQKKLVACI++N+I   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

A0A6J1I2Q4 uncharacterized protein LOC1114700023.2e-5071.88Show/hide
Query:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP
        MAMR D FLALFF YAVVSEVT+ASLWDSRKLLDPA KDN+T TS V P+I+P SS+N+SDS PV+GKK  EPPPPA NNS SN+DSK L+NSSSGS   
Subjt:  MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPP

Query:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL
         VSE GNGKP  T K N TE G QSSN E CDG+ DNKKCRDQKKLVACI+SN+I   +L
Subjt:  TVSETGNGKPFVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCGCAGAGATTGGTTTCTGGCATTGTTTTTCGCTTATGCGGTTGTTTCGGAGGTAACCCATGCCTCGCTTTGGGACTCAAGAAAGTTGTTAGACCCGGCTCC
AAAAGATAACACCACGACAACGTCGGCAGTTTCCCCAGTGATCAATCCGGCTTCTTCAGTGAATAACTCGGATTCTGTGCCCGTTAACGGAAAGAAGCATACTGAGCCGC
CGCCACCAGCTCTTAACAACTCGTTGTCCAATGTGGATTCGAAAGTACTCAGTAATTCGAGTTCTGGTAGTCCACCACCTACTGTAAGCGAGACTGGTAACGGAAAGCCT
TTTGTCACAAAGAAGAATAACGATACTGAAGCCGGTCCTCAATCAAGTAATCATGAAAATTGTGATGGGATAGCAGACAACAAGAAGTGCAGGGACCAGAAGAAGTTGGT
TGCTTGTATCAAAAGTAATCTTATTGGTAAGTACGAGTTGCTCTTCCGCCCCTACTTGATTTACCATGCTTTTCCGTGT
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGCGCAGAGATTGGTTTCTGGCATTGTTTTTCGCTTATGCGGTTGTTTCGGAGGTAACCCATGCCTCGCTTTGGGACTCAAGAAAGTTGTTAGACCCGGCTCC
AAAAGATAACACCACGACAACGTCGGCAGTTTCCCCAGTGATCAATCCGGCTTCTTCAGTGAATAACTCGGATTCTGTGCCCGTTAACGGAAAGAAGCATACTGAGCCGC
CGCCACCAGCTCTTAACAACTCGTTGTCCAATGTGGATTCGAAAGTACTCAGTAATTCGAGTTCTGGTAGTCCACCACCTACTGTAAGCGAGACTGGTAACGGAAAGCCT
TTTGTCACAAAGAAGAATAACGATACTGAAGCCGGTCCTCAATCAAGTAATCATGAAAATTGTGATGGGATAGCAGACAACAAGAAGTGCAGGGACCAGAAGAAGTTGGT
TGCTTGTATCAAAAGTAATCTTATTGGTAAGTACGAGTTGCTCTTCCGCCCCTACTTGATTTACCATGCTTTTCCGTGT
Protein sequenceShow/hide protein sequence
MAMRRDWFLALFFAYAVVSEVTHASLWDSRKLLDPAPKDNTTTTSAVSPVINPASSVNNSDSVPVNGKKHTEPPPPALNNSLSNVDSKVLSNSSSGSPPPTVSETGNGKP
FVTKKNNDTEAGPQSSNHENCDGIADNKKCRDQKKLVACIKSNLIGKYELLFRPYLIYHAFPC