CuGenDBv2

Gene ID	MS016554
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold1294:54831..55241
RNA-Seq Expression	MS016554
Synteny	MS016554
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580427.1 hypothetical protein SDJN03_20429, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-67

87.59

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K+ILDAGNGECVLY  PLVSGE+L L LPSFDQL TPVNGAYFLI+AV+IF GSWACCKFRRR  GGIPYQELEMALPESSSAVNVETA+GWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTAR NKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

KAG6596304.1 hypothetical protein SDJN03_09484, partial [Cucurbita argyrosperma subsp. sororia]

4.7e-67

88.32

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++LDAGNGECVLYT PLVSGEDL L LPSFDQLVTPVNGAYFLI+AV+IF GSWAC K RRR  GGIPYQELEMALPESSSAV VETAEGWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTARPNKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

KAG7017185.1 hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma]

8.0e-67

87.59

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K+ILDAGNGECVLY  PLVSGE+L L LPSFDQL TPVNGAYFLI+AV+IF GSWACCKFRRR  GGIPYQELEMALPESSSAVNVETA+GWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTAR NKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

XP_022941631.1 uncharacterized protein LOC111446930 [Cucurbita moschata]

4.7e-67

88.32

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++LDAGNGECVLYT PLVSGEDL L LPSFDQLVTPVNGAYFLI+AV+IF GSWAC K RRR  GGIPYQELEMALPESSSAV VETAEGWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTARPNKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

XP_023540201.1 uncharacterized protein LOC111800645 [Cucurbita pepo subsp. pepo]

4.7e-67

88.32

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++LDAGNGECVLYT PLVSGEDL L LPSFDQLVTPVNGAYFLI+AV+IF GSWAC K RRR  GGIPYQELEMALPESSSAV VETAEGWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTARPNKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

TrEMBL top hits

e value

%identity

Alignment

A0A2N9I2C9 Uncharacterized protein

8.4e-54

71.74

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRR-HPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDD
        K+IL+AGNGEC L  DP   GE   +  PS+D+LVTPVNGAYFLI  V++F G+WACCKFR++ H GG+PYQELEM++PES SA+NVE+AEGWDQGWDDD
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRR-HPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDD

Query:  WDEENSVKTPGGRHVGSISANGLTAR-PNKDGWENDWD
        WDEEN+VK+PGGRHVGSISANGLT+R  N+DGWENDW+
Subjt:  WDEENSVKTPGGRHVGSISANGLTAR-PNKDGWENDWD

A0A6J1F4I5 uncharacterized protein LOC111442092

3.9e-67

87.59

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K+ILDAGNGECVLY  PLVSGE+L L LPSFDQL TPVNGAYFLI+AV+IF GSWACCKFRRR  GGIPYQELEMALPESSSAVNVETA+GWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTAR NKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

A0A6J1FLM5 uncharacterized protein LOC111446930

2.3e-67

88.32

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++LDAGNGECVLYT PLVSGEDL L LPSFDQLVTPVNGAYFLI+AV+IF GSWAC K RRR  GGIPYQELEMALPESSSAV VETAEGWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTARPNKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

A0A6J1I2Q4 uncharacterized protein LOC111470002

1.2e-65

86.13

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++L+AGNGECVLYT PLV+GEDL L LPSFDQLVTPVNGAYFLI+AV+IF GSWAC K RRR  GGIPYQELEMALPESSSAV VETA GWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTARPNKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

A0A6J1J516 uncharacterized protein LOC111481426

2.3e-64

85.4

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Query:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW
        K++LDAGNGECVLY  PLVS E+L L LPSFDQL TPVNGAYFLI+A V+F GSWACCKFRRR  GGIPYQELEMALPESSSAVNVETA+GWDQGWDDDW
Subjt:  KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDW

Query:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV
        DEEN+VK+PGGRH+GSISANGLTAR NKDGWENDWDV
Subjt:  DEENSVKTPGGRHVGSISANGLTARPNKDGWENDWDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51580.1 unknown protein

2.4e-37

55.17

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Query:  KVILDAGNGECVLYTDPLVSGEDLL-LRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFR--RRHPGGIPYQELEMA----LPESSSAVNVETAEGWD
        K+ILD G G+C L+  P  S E  L    PS+++LVTP+NGAYFLI++V+IF G WA C  R  RR   G+PY+ELE++    L   S   +VETA+ WD
Subjt:  KVILDAGNGECVLYTDPLVSGEDLL-LRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFR--RRHPGGIPYQELEMA----LPESSSAVNVETAEGWD

Query:  QGWDDDWDEENSVKTPGGRHVG-SISANGLTAR-PNKDGWENDWD
        +GWDDDWDE N+VK+PG      SISANGLTAR PN+DGW++DWD
Subjt:  QGWDDDWDEENSVKTPGGRHVG-SISANGLTAR-PNKDGWENDWD

AT3G51580.2 unknown protein

2.4e-37

55.17

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Query:  KVILDAGNGECVLYTDPLVSGEDLL-LRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFR--RRHPGGIPYQELEMA----LPESSSAVNVETAEGWD
        K+ILD G G+C L+  P  S E  L    PS+++LVTP+NGAYFLI++V+IF G WA C  R  RR   G+PY+ELE++    L   S   +VETA+ WD
Subjt:  KVILDAGNGECVLYTDPLVSGEDLL-LRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFR--RRHPGGIPYQELEMA----LPESSSAVNVETAEGWD

Query:  QGWDDDWDEENSVKTPGGRHVG-SISANGLTAR-PNKDGWENDWD
        +GWDDDWDE N+VK+PG      SISANGLTAR PN+DGW++DWD
Subjt:  QGWDDDWDEENSVKTPGGRHVG-SISANGLTAR-PNKDGWENDWD

Sequences

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CDS sequence

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AAAGTAATATTAGATGCTGGAAATGGAGAATGCGTGCTTTACACAGACCCTCTTGTTTCTGGAGAAGACCTTCTTCTGCGTCTCCCTTCATTTGACCAACTAGTGACACC
AGTAAACGGTGCTTACTTCTTAATTATTGCAGTAGTAATCTTTGCGGGGTCGTGGGCCTGCTGCAAGTTTAGGAGGAGACATCCAGGTGGCATCCCATATCAAGAGCTTG
AAATGGCACTGCCAGAATCTTCCTCGGCTGTGAACGTCGAAACTGCTGAAGGTTGGGATCAGGGTTGGGATGATGACTGGGATGAAGAAAATTCTGTGAAAACGCCAGGG
GGACGCCATGTTGGAAGTATCTCGGCTAATGGGCTTACTGCTAGACCCAACAAAGATGGGTGGGAGAATGATTGGGATGTT

mRNA sequence

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Protein sequence

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KVILDAGNGECVLYTDPLVSGEDLLLRLPSFDQLVTPVNGAYFLIIAVVIFAGSWACCKFRRRHPGGIPYQELEMALPESSSAVNVETAEGWDQGWDDDWDEENSVKTPG
GRHVGSISANGLTARPNKDGWENDWDV

MS016554 (gene) of Bitter gourd (TR) v1 genome