CuGenDBv2

Gene ID	MS016564
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function (DUF1191)
Genome location	scaffold1294:121939..122230
RNA-Seq Expression	MS016564
Synteny	MS016564
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6771755.1 hypothetical protein POTOM_023147 [Populus tomentosa]

2.5e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS  YYPL    PGYTY+APVLGLLAYNAS L+
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

XP_006381269.1 uncharacterized protein LOC18100024 isoform X1 [Populus trichocarpa]

2.5e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS+ YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

XP_011006267.1 PREDICTED: uncharacterized protein LOC105112300 [Populus euphratica]

4.2e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        VRP+TG+PYDG VPSN+T IKIAAMR+RSGSLR RGV  YKEF      VV+PYV+R+ LVYQNLGNWS  YYPL    PGY YLAPVLGLLAYNA  LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

XP_024458554.1 uncharacterized protein LOC18100024 isoform X2 [Populus trichocarpa]

2.5e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS+ YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

XP_034913748.1 uncharacterized protein LOC118048252 isoform X1 [Populus alba]

4.2e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS  YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

TrEMBL top hits

e value

%identity

Alignment

A0A2K2A0E6 Uncharacterized protein

1.2e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS+ YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

A0A4U5QRZ8 Uncharacterized protein

2.0e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS  YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

A0A5N5MAR2 Uncharacterized protein

1.7e-29

70.3

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Query:  PKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEFV------VKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLSAS
        P+TG+PY+G VPSN+T IKIAAMR+RSGSLR RGV  Y+EFV      V PYV+RV LVYQNLGNWSQ YYPL    PGYTY+APVLGLLAY+AS LSA+
Subjt:  PKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEFV------VKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLSAS

Query:  S
        +
Subjt:  S

A0A6M2EGV5 Uncharacterized protein

2.0e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS  YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

B9MTT5 Uncharacterized protein

1.2e-30

70.87

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Query:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS
        V P+TG+PYDG VPSN+T IKIAAMR+RSGSL+SRGV  YKEF      VV+PYV+RV LVYQNLGNWS+ YYPL    PGYTY+APVLGLLAY+AS LS
Subjt:  VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLS

Query:  ASS
        A++
Subjt:  ASS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G62981.1 Protein of unknown function (DUF1191)

2.0e-09

41.49

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Query:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGN-WSQHYYPLALPMPGYTYLAPVLGLLAYNA
        KTG+    ++PS+ + IK+ A+R R GSLR  G ++ +EF      +++P  +R+ +V Q+LG+ WS  YY     + GY  ++PVLGLLAYNA
Subjt:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGN-WSQHYYPLALPMPGYTYLAPVLGLLAYNA

AT1G62981.2 Protein of unknown function (DUF1191)

2.0e-09

41.49

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Query:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGN-WSQHYYPLALPMPGYTYLAPVLGLLAYNA
        KTG+    ++PS+ + IK+ A+R R GSLR  G ++ +EF      +++P  +R+ +V Q+LG+ WS  YY     + GY  ++PVLGLLAYNA
Subjt:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGN-WSQHYYPLALPMPGYTYLAPVLGLLAYNA

AT3G08600.1 Protein of unknown function (DUF1191)

5.7e-25

58.82

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Query:  VRPKTGLPYDG-NVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQL
        +RP+TG+ Y+   VPSN+T IK+AAMR+RSGS R RGV+ + EF      +VKPYV R+ LVYQNL N+S  YYPL+    GY Y+APVLGLLAY+A  L
Subjt:  VRPKTGLPYDG-NVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQL

Query:  SA
        SA
Subjt:  SA

AT4G11950.1 Protein of unknown function (DUF1191)

1.9e-12

46.39

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Query:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLG-NWSQHYYPLALPMPGYTY--LAPVLGLLAYNAS
        KTG     ++PSN + I IA  + R GSLR  G +R  EF       V+P V+RV LV QNLG NWS + Y     + GY Y  ++PVLGLLAYN++
Subjt:  KTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLG-NWSQHYYPLALPMPGYTY--LAPVLGLLAYNAS

AT4G22900.1 Protein of unknown function (DUF1191)

1.7e-08

41.67

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Query:  TGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLG-NWSQHYYPLALPMPGYTY--LAPVLGLLAYNAS
        TG+     +PSN + I I  +++R GSLR  G ++  EF       V+P  +RV L+ QN G NWS   Y     + GY Y  ++PVLGLLAYNA+
Subjt:  TGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEF------VVKPYVQRVALVYQNLG-NWSQHYYPLALPMPGYTY--LAPVLGLLAYNAS

Sequences

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CDS sequence

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GTACGACCGAAGACAGGGCTTCCCTACGACGGGAATGTGCCGTCAAATATGACGGTGATTAAGATTGCAGCAATGCGGGTGAGGAGTGGTAGCTTAAGAAGTAGAGGCGT
GAGCAGGTACAAGGAGTTTGTTGTGAAGCCATATGTGCAGAGGGTTGCTTTAGTTTACCAGAATTTGGGCAATTGGTCGCAACACTATTACCCCTTGGCCTTGCCTATGC
CTGGTTACACATACCTGGCTCCGGTGTTGGGTCTTCTAGCCTACAATGCTTCCCAATTATCTGCCTCCTCC

mRNA sequence

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Protein sequence

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VRPKTGLPYDGNVPSNMTVIKIAAMRVRSGSLRSRGVSRYKEFVVKPYVQRVALVYQNLGNWSQHYYPLALPMPGYTYLAPVLGLLAYNASQLSASS

MS016564 (gene) of Bitter gourd (TR) v1 genome