; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016565 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016565
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionKH domain-containing protein
Genome locationscaffold1294:124756..125080
RNA-Seq ExpressionMS016565
SyntenyMS016565
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR032377 - STAR protein, homodimerisation region
IPR045071 - KH domain-containing BBP-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5561840.1 hypothetical protein DKX38_006797 [Salix brachista]2.8e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQILPICSRLLNQG+
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

XP_004137670.3 KH domain-containing protein At3g08620 [Cucumis sativus]3.7e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIR+S DADSQYLSELLAEHQKLGPFMQILPICSRLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

XP_022157317.1 KH domain-containing protein At3g08620-like [Momordica charantia]5.7e-2296.55Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

XP_022941600.1 KH domain-containing protein At2g38610 [Cucurbita moschata]3.7e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

XP_038905002.1 KH domain-containing protein At3g08620-like isoform X1 [Benincasa hispida]1.6e-2194.83Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRSS DADSQYLSELLAEHQKLGPFMQILPICSRLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

TrEMBL top hitse value%identityAlignment
A0A5N5N2R6 KH domain-containing protein1.4e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRS+ D DSQYLSELLAEHQKLGPFMQILPICSRLLNQG+
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

A0A6J1AWN9 KH domain-containing protein At2g386102.3e-2191.38Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRS+AD DSQYLSELLAEHQKLGPFMQ+LPICSRLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

A0A6J1DU72 KH domain-containing protein At3g08620-like2.7e-2296.55Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

A0A6J1FU50 KH domain-containing protein At2g386101.8e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

A0A6J1I3I7 KH domain-containing protein At2g38610-like1.8e-2193.1Show/hide
Query:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYNPNFSPARAASPQIR+SADADSQYLSELLAEHQKLGPFMQILPIC RLLNQ +
Subjt:  MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

SwissProt top hitse value%identityAlignment
Q75GR5 KH domain-containing protein SPIN13.0e-1876.27Show/hide
Query:  MSGLYNPNFSPARAASPQIRSS-ADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLY+P FSPAR  SPQIRS+  D DSQYL+ELLAEHQKLGPFMQ+LPICS+LL+Q +
Subjt:  MSGLYNPNFSPARAASPQIRSS-ADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

Q8GWR3 KH domain-containing protein At1g09660/At1g096701.9e-0451.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

Q8GYR4 KH domain-containing protein At3g086207.9e-1980Show/hide
Query:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYN  NFSP+RAASPQIR+ S+D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQ +
Subjt:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV

Q9ZVI3 KH domain-containing protein At2g386107.4e-1779.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

Arabidopsis top hitse value%identityAlignment
AT1G09660.1 RNA-binding KH domain-containing protein1.3e-0551.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

AT1G09660.2 RNA-binding KH domain-containing protein1.3e-0551.11Show/hide
Query:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        ASP       +D  +YL+ELL E QKLGPF+Q++P C RLLN  +
Subjt:  ASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQGV

AT2G38610.1 RNA-binding KH domain-containing protein5.3e-1879.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

AT2G38610.2 RNA-binding KH domain-containing protein5.3e-1879.66Show/hide
Query:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ
        MSGLYN +  FSPARAASPQIRS+ + D SQYL+ELLAEHQKL PFMQ+LPICSRLLNQ
Subjt:  MSGLYNPN--FSPARAASPQIRSSADAD-SQYLSELLAEHQKLGPFMQILPICSRLLNQ

AT3G08620.1 RNA-binding KH domain-containing protein5.6e-2080Show/hide
Query:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV
        MSGLYN  NFSP+RAASPQIR+ S+D DSQY+S+LLAEHQKLGPFMQ+LPICSRLLNQ +
Subjt:  MSGLYN-PNFSPARAASPQIRS-SADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCCCAGATTAGAAGCAGCGCTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCTGAGCA
TCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTATTAAATCAAGGTGTT
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGTTTGTATAATCCCAACTTCTCTCCTGCAAGAGCTGCTTCTCCCCAGATTAGAAGCAGCGCTGATGCTGACAGCCAGTACCTGTCGGAGCTGTTGGCTGAGCA
TCAGAAACTCGGACCCTTCATGCAAATCCTTCCTATTTGTAGCCGACTATTAAATCAAGGTGTT
Protein sequenceShow/hide protein sequence
MSGLYNPNFSPARAASPQIRSSADADSQYLSELLAEHQKLGPFMQILPICSRLLNQGV