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MS016604 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016604
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAgglutinin domain-containing protein
Genome locationscaffold442:192268..192636
RNA-Seq ExpressionMS016604
SyntenyMS016604
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7051157.1 hypothetical protein CFC21_059427 [Triticum aestivum]1.9e-1945.83Show/hide
Query:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD
        TWS+T+S KIGVTTK +  GIP I  G VE+STE  SEY WG + Q   + E +Y   VPP ++V I A   QG   VPFSY  +D+   G+ V + + D
Subjt:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD

Query:  GLFIGLNSYDYEFMSKAVPM
        GLF G+N+Y+++F +   P+
Subjt:  GLFIGLNSYDYEFMSKAVPM

XP_022155409.1 uncharacterized protein LOC111022557 [Momordica charantia]1.9e-1945.3Show/hide
Query:  WSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKH-RNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHDG
        W+  L  K GV+ +F   G+P IG GS+ +S   G EY+WGETQK  R    +  +TVPP S+V++NA+VK+G C VPFSY K D   +G ++     DG
Subjt:  WSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKH-RNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHDG

Query:  LFIGLNSYDYEFMSKAV
        +F G+ SYD++F S  V
Subjt:  LFIGLNSYDYEFMSKAV

XP_022155413.1 uncharacterized protein LOC111022561 [Momordica charantia]7.4e-4069.11Show/hide
Query:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRNN-ELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH
        T W++TLS+ IGVTTKF+  G+P +G G +E+S E GS Y WGET KH+N  EL YPVTVPP SRV+INAVVKQGMC+VPFSY + D+  NG+RVVH+LH
Subjt:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRNN-ELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH

Query:  DGLFIGLNSYDYEFMSKAVPMES
        DGLF G+NSYDYEFMSK VPMES
Subjt:  DGLFIGLNSYDYEFMSKAVPMES

XP_022157622.1 uncharacterized protein LOC111024282 [Momordica charantia]8.2e-3156.56Show/hide
Query:  WSATLSSKIGVTTKFKLD-GIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHD
        WS+++SSKIGV+   K   GIP++G G +E+  E G+EY WG T K +N  E TYPVTVPP SRV+INAV+KQG+C+VPFSY + DV   G++VVH+L+D
Subjt:  WSATLSSKIGVTTKFKLD-GIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHD

Query:  GLFIGLNSYDYEFMSKAVPMES
        GLF G+NSYD+EF S+   + S
Subjt:  GLFIGLNSYDYEFMSKAVPMES

XP_022157623.1 uncharacterized protein LOC111024284 [Momordica charantia]5.0e-4475.81Show/hide
Query:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH
        TTWSATLSSKIG+TTKFKL+GIP IGSGS+EISTE G+EYSWG+T KH++  ELTYPVTVPP SRVEI+AVVKQGMCKVPF+Y + DVF+NG+ V     
Subjt:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH

Query:  DGLFIGLNSYDYEFMSKAVPMESP
        DGLF G+NSYDYEF S+AVPMESP
Subjt:  DGLFIGLNSYDYEFMSKAVPMESP

TrEMBL top hitse value%identityAlignment
A0A3B6IWY8 Agglutinin domain-containing protein9.2e-2045.83Show/hide
Query:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD
        TWS+T+S KIGVTTK +  GIP I  G VE+STE  SEY WG + Q   + E +Y   VPP ++V I A   QG   VPFSY  +D+   G+ V + + D
Subjt:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD

Query:  GLFIGLNSYDYEFMSKAVPM
        GLF G+N+Y+++F +   P+
Subjt:  GLFIGLNSYDYEFMSKAVPM

A0A6J1DMW2 uncharacterized protein LOC1110225613.6e-4069.11Show/hide
Query:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRNN-ELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH
        T W++TLS+ IGVTTKF+  G+P +G G +E+S E GS Y WGET KH+N  EL YPVTVPP SRV+INAVVKQGMC+VPFSY + D+  NG+RVVH+LH
Subjt:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRNN-ELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH

Query:  DGLFIGLNSYDYEFMSKAVPMES
        DGLF G+NSYDYEFMSK VPMES
Subjt:  DGLFIGLNSYDYEFMSKAVPMES

A0A6J1DTU6 uncharacterized protein LOC1110242842.4e-4475.81Show/hide
Query:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH
        TTWSATLSSKIG+TTKFKL+GIP IGSGS+EISTE G+EYSWG+T KH++  ELTYPVTVPP SRVEI+AVVKQGMCKVPF+Y + DVF+NG+ V     
Subjt:  TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLH

Query:  DGLFIGLNSYDYEFMSKAVPMESP
        DGLF G+NSYDYEF S+AVPMESP
Subjt:  DGLFIGLNSYDYEFMSKAVPMESP

A0A6J1DUY9 uncharacterized protein LOC1110242824.0e-3156.56Show/hide
Query:  WSATLSSKIGVTTKFKLD-GIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHD
        WS+++SSKIGV+   K   GIP++G G +E+  E G+EY WG T K +N  E TYPVTVPP SRV+INAV+KQG+C+VPFSY + DV   G++VVH+L+D
Subjt:  WSATLSSKIGVTTKFKLD-GIPNIGSGSVEISTEQGSEYSWGETQKHRN-NELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCK-DVFHNGQRVVHNLHD

Query:  GLFIGLNSYDYEFMSKAVPMES
        GLF G+NSYD+EF S+   + S
Subjt:  GLFIGLNSYDYEFMSKAVPMES

M8A350 Natterin-49.2e-2045.83Show/hide
Query:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD
        TWS+T+S KIGVT K +  GIP I  G VE+STE  SEY WG + Q   + E +Y   VPP ++V I A V QG   VPFSY  +D+   G+ V + + D
Subjt:  TWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGET-QKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYC-KDVFHNGQRVVHNLHD

Query:  GLFIGLNSYDYEFMSKAVPM
        GLF G+N+Y+++F +   P+
Subjt:  GLFIGLNSYDYEFMSKAVPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAACTTGGTCTGCTACCCTCTCATCCAAGATTGGTGTGACAACAAAATTCAAATTAGATGGGATTCCCAATATTGGAAGTGGAAGTGTTGAAATTTCAACTGAGCAGGG
GAGTGAATATTCATGGGGAGAAACCCAAAAACACAGAAATAATGAACTTACTTACCCTGTGACTGTGCCTCCAAATTCAAGAGTGGAGATTAATGCTGTGGTGAAACAAG
GGATGTGCAAAGTTCCTTTCTCGTATTGTAAAGATGTTTTCCATAATGGACAACGAGTCGTTCATAATCTACACGATGGACTTTTCATTGGCCTCAACTCCTACGACTAT
GAATTCATGTCTAAAGCTGTGCCAATGGAGTCACCA
mRNA sequenceShow/hide mRNA sequence
ACAACTTGGTCTGCTACCCTCTCATCCAAGATTGGTGTGACAACAAAATTCAAATTAGATGGGATTCCCAATATTGGAAGTGGAAGTGTTGAAATTTCAACTGAGCAGGG
GAGTGAATATTCATGGGGAGAAACCCAAAAACACAGAAATAATGAACTTACTTACCCTGTGACTGTGCCTCCAAATTCAAGAGTGGAGATTAATGCTGTGGTGAAACAAG
GGATGTGCAAAGTTCCTTTCTCGTATTGTAAAGATGTTTTCCATAATGGACAACGAGTCGTTCATAATCTACACGATGGACTTTTCATTGGCCTCAACTCCTACGACTAT
GAATTCATGTCTAAAGCTGTGCCAATGGAGTCACCA
Protein sequenceShow/hide protein sequence
TTWSATLSSKIGVTTKFKLDGIPNIGSGSVEISTEQGSEYSWGETQKHRNNELTYPVTVPPNSRVEINAVVKQGMCKVPFSYCKDVFHNGQRVVHNLHDGLFIGLNSYDY
EFMSKAVPMESP