CuGenDBv2

Gene ID	MS016609
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	HMA domain-containing protein
Genome location	scaffold442:270082..272352
RNA-Seq Expression	MS016609
Synteny	MS016609
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006121 - Heavy metal-associated domain, HMA IPR036163 - Heavy metal-associated domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581006.1 hypothetical protein SDJN03_21008, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-60

76.63

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASIS F ALHS+SRP  ANP+ IS  S +LP +S+ + +AASFR+S V+G  R R LK+V  VEEDA++PEQ VEGEA  P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

XP_022150072.1 uncharacterized protein LOC111018338 [Momordica charantia]

3.9e-85

98.9

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Query:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF
        MASISTFSALHSISRPRPANPALIST SISLPTSNLSFAAASFRNSPVQGERRRRRLKR TAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF

Query:  FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA
        FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA
Subjt:  FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA

XP_022934914.1 uncharacterized protein LOC111441946 [Cucurbita moschata]

1.6e-59

76.09

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASIS F ALHS+SRP  ANP+ IS  S +LP +S+ + +AASF +S V+G  R R LK+V  VEEDA++PEQ VEGEA  P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

XP_022983877.1 uncharacterized protein LOC111482359 [Cucurbita maxima]

3.4e-57

74.46

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASIS F ALHS+SRP  ANP+ I   S +LP +S+   +AA+FR+S  +G  R R LK+V  VEEDA++PEQ  EGEA  P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

XP_023526965.1 uncharacterized protein LOC111790332 [Cucurbita pepo subsp. pepo]

6.2e-59

75.54

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGE--APLPSEQPAVTVPVSPSDIL
        MASIS F ALHSISRP  ANP+ IS    +LP +S+ + +AASFR+S V+G  R R LK+   VEEDA++PEQ VEGE  +P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGE--APLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B868 uncharacterized protein LOC103487059 isoform X1

6.5e-54

73.91

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Query:  MASISTFSALHSISRPRPANPALISTTSISLPTS-NLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASISTF ALH    P P N + +   S SLP+S N + +AASFR+SPVQG    R LK+V AVEEDA++PE  VE EA  P PS+ PAVTVPVSPSD+L
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLPTS-NLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+AIPSVTEALEQTEGIT LKV+V EGIASV LTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+D+EEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

A0A5D3D1F9 Heavy-metal-associated domain-containing protein

6.5e-54

73.91

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Query:  MASISTFSALHSISRPRPANPALISTTSISLPTS-NLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASISTF ALH    P P N + +   S SLP+S N + +AASFR+SPVQG    R LK+V AVEEDA++PE  VE EA  P PS+ PAVTVPVSPSD+L
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLPTS-NLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+AIPSVTEALEQTEGIT LKV+V EGIASV LTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+D+EEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

A0A6J1D9Q3 uncharacterized protein LOC111018338

1.9e-85

98.9

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Query:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF
        MASISTFSALHSISRPRPANPALIST SISLPTSNLSFAAASFRNSPVQGERRRRRLKR TAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMF

Query:  FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA
        FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA
Subjt:  FQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA

A0A6J1F3X5 uncharacterized protein LOC111441946

7.9e-60

76.09

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASIS F ALHS+SRP  ANP+ IS  S +LP +S+ + +AASF +S V+G  R R LK+V  VEEDA++PEQ VEGEA  P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

A0A6J1J0J2 uncharacterized protein LOC111482359

1.7e-57

74.46

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Query:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL
        MASIS F ALHS+SRP  ANP+ I   S +LP +S+   +AA+FR+S  +G  R R LK+V  VEEDA++PEQ  EGEA  P PSEQPAVTVPVS SDIL
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLP-TSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEA--PLPSEQPAVTVPVSPSDIL

Query:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF
        TMFFQAEGTLNE+A+PSVTEALEQT+GIT LKV++VEGIASVELTKQTTIQSTGVASSLIE IQGAGFKLQTLNLSF+DKEEVF
Subjt:  TMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14910.1 Heavy metal transport/detoxification superfamily protein

8.7e-35

50.8

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Query:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSF---AAASFRNSPVQG--ERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQP--AVTVPVSP
        MASI+  S  HS  R +  N   +S+T +   + NL+F   A  + RN    G  ++ R  L++++++ E         EG A +  EQP   V+VPVSP
Subjt:  MASISTFSALHSISRPRPANPALISTTSISLPTSNLSF---AAASFRNSPVQG--ERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQP--AVTVPVSP

Query:  SDILTMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEV
        SD+LTMFFQA+GTLNE AIP+VT AL+  +G+++LKV+V EG+A VEL KQTT+Q+TGVAS+L+E IQGAGFKLQTLNLSF+D +EV
Subjt:  SDILTMFFQAEGTLNETAIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEV

Sequences

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CDS sequence

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ATGGCTTCAATCTCCACCTTCTCCGCTCTCCACTCTATTTCTCGCCCTCGGCCTGCAAATCCAGCCCTAATTTCCACAACTTCCATCTCGCTTCCCACCTCTAACCTCTC
CTTCGCCGCCGCTTCATTCAGGAACTCGCCGGTTCAGGGCGAGAGGCGGCGGCGCCGGTTGAAACGAGTGACGGCGGTCGAAGAGGATGCTGCACTTCCGGAGCAAGAAG
TTGAAGGCGAAGCGCCTTTGCCGTCTGAGCAGCCCGCGGTCACCGTGCCCGTTTCGCCCTCTGATATTCTCACCATGTTCTTTCAGGCAGAGGGGACACTAAATGAAACA
GCTATTCCTTCTGTAACTGAGGCATTGGAGCAAACGGAGGGTATCACTGATTTGAAGGTTAAAGTTGTTGAGGGCATTGCATCTGTTGAGCTTACGAAACAGACGACCAT
ACAATCGACAGGAGTGGCGTCGAGCTTGATCGAGGCCATTCAGGGTGCAGGTTTCAAGTTACAAACGTTAAATCTGAGTTTCAAGGACAAGGAAGAAGTTTTTGCT

mRNA sequence

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Protein sequence

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MASISTFSALHSISRPRPANPALISTTSISLPTSNLSFAAASFRNSPVQGERRRRRLKRVTAVEEDAALPEQEVEGEAPLPSEQPAVTVPVSPSDILTMFFQAEGTLNET
AIPSVTEALEQTEGITDLKVKVVEGIASVELTKQTTIQSTGVASSLIEAIQGAGFKLQTLNLSFKDKEEVFA

MS016609 (gene) of Bitter gourd (TR) v1 genome