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MS016630 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016630
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold587:31844..32044
RNA-Seq ExpressionMS016630
SyntenyMS016630
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNT29920.1 hypothetical protein POPTR_006G056000 [Populus trichocarpa]3.6e-0454.24Show/hide
Query:  AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Subjt:  AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

PON58105.1 hypothetical protein PanWU01x14_168750 [Parasponia andersonii]3.3e-0555.22Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SG VVG++L+LS+  LL+H
Subjt:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

PON91673.1 hypothetical protein TorRG33x02_125040 [Trema orientale]8.6e-0656.72Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SGAVVG++L+LS+  LL+H
Subjt:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

TrEMBL top hitse value%identityAlignment
A0A2P5CAT1 Uncharacterized protein1.6e-0555.22Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SG VVG++L+LS+  LL+H
Subjt:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

A0A2P5F1K4 Uncharacterized protein4.1e-0656.72Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S ST  F    +L V +A LA A D APAPAP   AGSG+SLP+SGAVVG++L+LS+  LL+H
Subjt:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

F6HL53 Uncharacterized protein2.3e-0452.94Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAV-ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S++ AF +  F++A+ SAA  V A D +PAPAP+ +AGS FSLP+SGAVV S+L+ SLL  L++
Subjt:  MAKASVSTAFFVAAFILAVCSAALAV-ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

U5FKQ0 Uncharacterized protein6.6e-0446.27Show/hide
Query:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        MA+ S+  A  +   I    +A  A   + APAPAP  +AG+GFSLP+SGA+VG +L++SLL  L+H
Subjt:  MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

U7DW91 Uncharacterized protein1.7e-0454.24Show/hide
Query:  AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH
        AF+L +  AA AV     ++  APAPAP  EAG+GFSLP+SGA+VG +L++SLL  L+H
Subjt:  AFILAVCSAALAV-----ADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGC
GCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCCGTCGTTGGCTCCGCTCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAGCTTCAGTCTCCACGGCCTTCTTCGTCGCCGCCTTCATCCTCGCCGTCTGCTCCGCCGCACTCGCAGTCGCCGATGACTTCGCTCCGGCGCCTGCTCCAGC
GCGTGAGGCCGGATCCGGCTTCTCTCTCCCCATCTCCGGTGCCGTCGTTGGCTCCGCTCTCATCCTCTCTCTTCTTCACCTTCTCAGGCAT
Protein sequenceShow/hide protein sequence
MAKASVSTAFFVAAFILAVCSAALAVADDFAPAPAPAREAGSGFSLPISGAVVGSALILSLLHLLRH