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MS016632 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016632
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description3-deoxy-8-phosphooctulonate synthase
Genome locationscaffold587:63018..63279
RNA-Seq ExpressionMS016632
SyntenyMS016632
Gene Ontology termsGO:0046364 - monosaccharide biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity (molecular function)
InterPro domainsIPR006218 - DAHP synthetase I/KDSA
IPR006269 - 3-deoxy-8-phosphooctulonate synthase
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067701.1 2-dehydro-3-deoxyphosphooctonate aldolase [Cucumis melo var. makuwa]4.3e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

XP_004150183.1 2-dehydro-3-deoxyphosphooctonate aldolase [Cucumis sativus]4.3e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

XP_008457489.1 PREDICTED: 2-dehydro-3-deoxyphosphooctonate aldolase [Cucumis melo]4.3e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

XP_022156822.1 2-dehydro-3-deoxyphosphooctonate aldolase [Momordica charantia]4.3e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

XP_031283337.1 LOW QUALITY PROTEIN: 2-dehydro-3-deoxyphosphooctonate aldolase 1 [Pistacia vera]1.6e-1180.85Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT KIINIKK QFCAPS MTNSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

TrEMBL top hitse value%identityAlignment
A0A0A0LY00 3-deoxy-8-phosphooctulonate synthase2.1e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

A0A1S3C5L9 3-deoxy-8-phosphooctulonate synthase2.1e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

A0A5D3DF13 3-deoxy-8-phosphooctulonate synthase2.1e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

A0A5N6Q4J8 3-deoxy-8-phosphooctulonate synthase7.9e-1278.72Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT KIINIKK QFCAPS MTNSAEK+R+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

A0A6J1DRF2 3-deoxy-8-phosphooctulonate synthase2.1e-1282.98Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT +IINIKK QFCAPS MTNSAEKIRMAGNSN++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

SwissProt top hitse value%identityAlignment
O50044 2-dehydro-3-deoxyphosphooctonate aldolase1.1e-1376.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA KT KIINIKK QFCAPS M NSAEK+R+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

Q2KVK9 2-dehydro-3-deoxyphosphooctonate aldolase7.9e-0959.57Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDL++A  KT K+INIKK QF +PS M + AEK R AGN  +I+CD
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

Q6NQL4 2-dehydro-3-deoxyphosphooctonate aldolase 23.8e-1168.09Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA ++ KIINIKK QFC  S M NSAEK+R+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

Q7V4M4 2-dehydro-3-deoxyphosphooctonate aldolase1.1e-0753.19Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDL+ A  KT  +INIKK QF +PS M+N  EK R  GN N+++C+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

Q9AV97 2-dehydro-3-deoxyphosphooctonate aldolase 13.1e-1376.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

Arabidopsis top hitse value%identityAlignment
AT1G79500.1 Aldolase-type TIM barrel family protein2.2e-1476.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

AT1G79500.2 Aldolase-type TIM barrel family protein2.2e-1476.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

AT1G79500.3 Aldolase-type TIM barrel family protein2.2e-1476.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

AT1G79500.4 Aldolase-type TIM barrel family protein2.2e-1476.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD

AT1G79500.5 Aldolase-type TIM barrel family protein2.2e-1476.6Show/hide
Query:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD
        QTDLLVAA +T KIINIKK QFCAPS M NSAEKIR+AGN N++VC+
Subjt:  QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGACTGATCTTCTAGTTGCCGCAGTCAAGACTCGAAAAATTATAAATATTAAGAAAGACCAGTTTTGTGCTCCATCTGCAATGACAAATTCTGCTGAAAAGATCAGAAT
GGCTGGAAATTCAAACATGATAGTTTGTGAC
mRNA sequenceShow/hide mRNA sequence
CAGACTGATCTTCTAGTTGCCGCAGTCAAGACTCGAAAAATTATAAATATTAAGAAAGACCAGTTTTGTGCTCCATCTGCAATGACAAATTCTGCTGAAAAGATCAGAAT
GGCTGGAAATTCAAACATGATAGTTTGTGAC
Protein sequenceShow/hide protein sequence
QTDLLVAAVKTRKIINIKKDQFCAPSAMTNSAEKIRMAGNSNMIVCD