; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016636 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016636
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationscaffold587:212993..213193
RNA-Seq ExpressionMS016636
SyntenyMS016636
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]1.0e-1980.6Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSAVPL LYVPP+RSL+LFVETLEDLL HTAIHT+  +PRFR+AFSRLF S F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]8.0e-2080.6Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSAVPL LYVPP+RSL+LFVETLEDLL HTAIHT+  +PRFR+AFSRLF S+F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1777.61Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSAVPL LYVPP+RSLNLFVETLE+LLR +A HTL ++PRFR AFSRLF S+F  S S
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1876.12Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSA PL  YVPP+RSLNLFVETLEDL RHTA HT   +PRFR+AFSR+F S+F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-1876.12Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSA PL  YVPP+RSLNLFVETLEDL RHTA HT   +PRFR+AFSR+F S+F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein3.9e-2080.6Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSAVPL LYVPP+RSL+LFVETLEDLL HTAIHT+  +PRFR+AFSRLF S+F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

A0A2C9V7E1 Uncharacterized protein2.6e-1673.85Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS
        MLQLFFAVAFSAVPL LYVPP+RSLN FVET+EDLLR TA ++L  +PRFR+AFSR+F +LF  S
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS

A0A2K1XB26 Uncharacterized protein2.6e-1670.77Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS
        MLQLFFAVAFSAVPL LYVPP+RSLNLFVET+ED+LR T+++T+  +PR R+ FSR FR+LF  S
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 15.0e-2080.6Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS
        MLQLFFAVAFSAVPL LYVPP+RSL+LFVETLEDLL HTAIHT+  +PRFR+AFSRLF S F  SYS
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X15.8e-1670.77Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS
        MLQLFFAVAFSAVPL LYVPP+RSLNLFVET+ED+LR T ++TL  +PR R+ FSR+F S+F  S
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein7.7e-1353.85Show/hide
Query:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS
        MLQLFF +AFSA PL LY+PP+R L +FVET+E++     +++  LFPR RIA+SRL    F +S
Subjt:  MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCAGTCGCTTTCTCGGCAGTGCCACTGGCGCTCTATGTGCCGCCGGTTCGGAGCCTCAATCTTTTCGTCGAAACCCTAGAGGATCTTCTTCG
TCACACTGCCATTCATACGCTCACACTTTTTCCTCGGTTTCGCATCGCCTTCTCTCGCCTCTTCCGCTCCCTCTTCGGCGCCTCCTATTCT
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCAGTCGCTTTCTCGGCAGTGCCACTGGCGCTCTATGTGCCGCCGGTTCGGAGCCTCAATCTTTTCGTCGAAACCCTAGAGGATCTTCTTCG
TCACACTGCCATTCATACGCTCACACTTTTTCCTCGGTTTCGCATCGCCTTCTCTCGCCTCTTCCGCTCCCTCTTCGGCGCCTCCTATTCT
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLALYVPPVRSLNLFVETLEDLLRHTAIHTLTLFPRFRIAFSRLFRSLFGASYS