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MS016637 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016637
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationscaffold587:218838..219038
RNA-Seq ExpressionMS016637
SyntenyMS016637
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]1.1e-2186.57Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLL HTAIHT+R YPRFR+AFSRLF S F  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]2.9e-2288.06Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLL HTAIHT+R YPRFR+AFSRLF SVF  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]8.0e-2085.07Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLE+LLR +A HTLRVYPRFR AFSRLF S+F  S S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2083.58Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLEDL RHTA HT R YPRFR+AFSR+F SVF  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2083.58Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLEDL RHTA HT R YPRFR+AFSR+F SVF  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein1.4e-2288.06Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLL HTAIHT+R YPRFR+AFSRLF SVF  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

A0A218W4I5 Uncharacterized protein2.8e-1885.25Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSV
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLR TA++TLR YPR R+A SR+F SV
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSV

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 15.4e-2286.57Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLEDLL HTAIHT+R YPRFR+AFSRLF S F  SYS
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X12.8e-1876.92Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+ED+LR T ++TLR YPR R+ FSR+F S+F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS

A0A6P6AMC9 uncharacterized protein LOC111310902 isoform X22.8e-1876.92Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+ED+LR T ++TLR YPR R+ FSR+F S+F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein5.3e-1456.92Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS
        MLQLFF +AFSA PLTLY+PPIR L +FVET+E++     +++ R++PR RIA+SRL    FS+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCAGTCGCTTTCTCGGCAGTGCCATTGACGCTGTACGTGCCGCCGATTCGGAGCCTCAATCTCTTCGTCGAAACCCTAGAGGATCTTCTTCG
TCACACTGCCATTCATACGCTCAGAGTTTATCCTCGGTTTCGCATCGCCTTCTCTCGCCTCTTCCGCTCCGTCTTCAGCGCCTCCTATTCT
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCAGTCGCTTTCTCGGCAGTGCCATTGACGCTGTACGTGCCGCCGATTCGGAGCCTCAATCTCTTCGTCGAAACCCTAGAGGATCTTCTTCG
TCACACTGCCATTCATACGCTCAGAGTTTATCCTCGGTTTCGCATCGCCTTCTCTCGCCTCTTCCGCTCCGTCTTCAGCGCCTCCTATTCT
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEDLLRHTAIHTLRVYPRFRIAFSRLFRSVFSASYS