; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016639 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016639
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionARM repeat superfamily protein
Genome locationscaffold587:259135..259257
RNA-Seq ExpressionMS016639
SyntenyMS016639
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037384.1 hypothetical protein SDJN02_01009 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1192.68Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VRFLSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
XP_022151623.1 uncharacterized protein LOC111019538 [Momordica charantia]8.3e-12100Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
XP_022928608.1 uncharacterized protein LOC111435467 [Cucurbita moschata]2.4e-1192.68Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VRFLSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
XP_023543534.1 uncharacterized protein LOC111803391 isoform X2 [Cucurbita pepo subsp. pepo]2.4e-1192.68Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VRFLSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
XP_023543535.1 uncharacterized protein LOC111803391 isoform X3 [Cucurbita pepo subsp. pepo]2.4e-1192.68Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VRFLSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
TrEMBL top hitse value%identityAlignment
A0A0A0L412 Uncharacterized protein1.5e-1195.12Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNAI+VRFLS+INEHLVKATDVVLKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
A0A5D3E1X6 Uncharacterized protein1.3e-1090.24Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNAI+VRFLS+INEH VKATDVVL+RILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
A0A6J1DCN8 uncharacterized protein LOC1110195384.0e-12100Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
A0A6J1EPJ3 uncharacterized protein LOC1114354671.2e-1192.68Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VRFLSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
A0A6J1HVT8 uncharacterized protein LOC1114671387.6e-1190.24Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MFAEPSNA++VR LSIINEHLVKATDV+LKRILSYVKGQKE
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57570.1 ARM repeat superfamily protein5.6e-0656.1Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MF EPSNAI+VRFLS I+E L   +D+VL  +LS++K Q +
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
AT3G57570.2 ARM repeat superfamily protein5.6e-0656.1Show/hide
Query:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE
        MF EPSNAI+VRFLS I+E L   +D+VL  +LS++K Q +
Subjt:  MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCAGAACCATCTAATGCAATTATTGTTAGATTCCTGAGTATTATAAACGAGCACTTGGTGAAAGCTACTGATGTAGTCCTAAAGCGCATTCTGTCATATGTGAA
AGGACAGAAAGAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCAGAACCATCTAATGCAATTATTGTTAGATTCCTGAGTATTATAAACGAGCACTTGGTGAAAGCTACTGATGTAGTCCTAAAGCGCATTCTGTCATATGTGAA
AGGACAGAAAGAG
Protein sequenceShow/hide protein sequence
MFAEPSNAIIVRFLSIINEHLVKATDVVLKRILSYVKGQKE