; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016642 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016642
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationscaffold587:326997..328235
RNA-Seq ExpressionMS016642
SyntenyMS016642
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR040295 - Protein root primordium defective 1-like
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017132.1 Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-20990.38Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIP+KL+RVRDHGYDNYM+VEKKTRK+LKFQDLILTQINQTIPVSRLDV ARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQ+KQAVIAQIPDAVTRLRKLLMMSN GRLRLEH+RIARSEFGLPDDFEYSVVL+YPQFFRLFDAKETRNKYIEIVERD NLTVCAIEKARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE+LCLTVEKKI+LERIAHFRLAM+LPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHT+FLREAYRR ELIEPNDVYLARR LAELVLLSPRKAKL+RELVGYRRERVGY+MESFR     D+ +D G G + NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDV----ESDFSEDDN
        SDV    ESD S+D N
Subjt:  SDV----ESDFSEDDN

XP_016898810.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]7.4e-20989.42Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPK LQRVRDHGYDNYMEVEKK RK+LKFQDLIL+Q NQTIPVSRLD+LARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQK+AVIAQIPDAVTRLRKLLMMSNKGRLRLEH+RIARSEFGLPDDFEYSVVL++PQFFRLFDAKETRNKYIEIVERD +LTVCAIE+ARERVYRE+GS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE+L LTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLRE YRR EL+EPNDVYLARR LAELVLLSPRKAKLDRELVGYRRERVGY+ME+ R DY +D+ +D GV  K NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  ----SDVESDFSEDDN
            SDVESDFS+DDN
Subjt:  ----SDVESDFSEDDN

XP_022151673.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]6.9e-23199.76Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFED GVGGKHNVRDVSD
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDVESDFSEDDND
        SDVESDFSEDDND
Subjt:  SDVESDFSEDDND

XP_022929109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]5.1e-21090.62Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIP+KL+RVRDHGYDNYM+VEKKTRK+LKFQDLILTQINQTIPVSRLDV ARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQ+KQAVIAQIPDAVTRLRKLLMMSN GRLRLEH+RIARSEFGLPDDFEYSVVL+YPQFFRLFDAKETRNKYIEIVERD NLTVCAIEKARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE+LCLTVEKKI+LERIAHFRLAM+LPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHT+FLREAYRR ELIEPNDVYLARR LAELVLLSPRKAKL+RELVGYRRERVGY+MESFR     D+ +D G G + NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDV----ESDFSEDDN
        SDV    ESDFS+D N
Subjt:  SDV----ESDFSEDDN

XP_038876292.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida]2.5e-21290.87Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        M+QSTSIPKKLQRVRDHGYDNYMEVEKKTRK+LKFQDLILTQINQTIPVSRLD+LARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQKQAVIAQIPDAVTRLRKLLMMSN GRLRLEH+RIARSEFGLPDDFEYSVVL+YPQFFRLFDAKETRNKYIEIVERD NL VCAIE+ARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYEDVS+YDMRSIEA KRMEKRAVATIHE+L LTVEKKITLERIAHFRLAMNLP KLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLRE YRR ELIEPNDVYLARRKLAELVLLSPRKAKLD+ELVGYRRERVGY+MESFR DY +D+F+D  VG K NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDVESD----FSEDDN
        SD++SD    FS+DDN
Subjt:  SDVESD----FSEDDN

TrEMBL top hitse value%identityAlignment
A0A1S4DS47 protein ROOT PRIMORDIUM DEFECTIVE 13.6e-20989.42Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPK LQRVRDHGYDNYMEVEKK RK+LKFQDLIL+Q NQTIPVSRLD+LARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQK+AVIAQIPDAVTRLRKLLMMSNKGRLRLEH+RIARSEFGLPDDFEYSVVL++PQFFRLFDAKETRNKYIEIVERD +LTVCAIE+ARERVYRE+GS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE+L LTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLRE YRR EL+EPNDVYLARR LAELVLLSPRKAKLDRELVGYRRERVGY+ME+ R DY +D+ +D GV  K NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  ----SDVESDFSEDDN
            SDVESDFS+DDN
Subjt:  ----SDVESDFSEDDN

A0A5A7UNY2 Protein ROOT PRIMORDIUM DEFECTIVE 18.0e-20989.18Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPK LQRVRDHGYDNYMEVEKK RK+LKFQDLIL+Q NQTIPVSRLD+LARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQK+AVIAQIPDAVTRLRKLLMMSNKGRLRLEH+RIARSEFGLPDDFEYSVVL++PQFFRLFDAKETRNKYIEIVERD +LTVCAIE+ARERVYRE+GS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE+L LTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLRE YRR +L+EPNDVYLARR LAELVLLSPRKAKLDRELVGYRRERVGY+ME+ R DY +D+ +D GV  K NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  ----SDVESDFSEDDN
            SDVESDFS+DDN
Subjt:  ----SDVESDFSEDDN

A0A5D3BLZ6 Protein ROOT PRIMORDIUM DEFECTIVE 13.6e-20989.42Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPK LQRVRDHGYDNYMEVEKK RK+LKFQDLIL+Q NQTIPVSRLD+LARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQK+AVIAQIPDAVTRLRKLLMMSNKGRLRLEH+RIARSEFGLPDDFEYSVVL++PQFFRLFDAKETRNKYIEIVERD +LTVCAIE+ARERVYRE+GS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE+L LTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLRE YRR EL+EPNDVYLARR LAELVLLSPRKAKLDRELVGYRRERVGY+ME+ R DY +D+ +D GV  K NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  ----SDVESDFSEDDN
            SDVESDFS+DDN
Subjt:  ----SDVESDFSEDDN

A0A6J1DCV7 protein ROOT PRIMORDIUM DEFECTIVE 13.3e-23199.76Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFED GVGGKHNVRDVSD
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDVESDFSEDDND
        SDVESDFSEDDND
Subjt:  SDVESDFSEDDND

A0A6J1EMT6 protein ROOT PRIMORDIUM DEFECTIVE 12.5e-21090.62Show/hide
Query:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
        MSQSTSIP+KL+RVRDHGYDNYM+VEKKTRK+LKFQDLILTQINQTIPVSRLDV ARRLGFKQH+AGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI
Subjt:  MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQI

Query:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS
        EQ+KQAVIAQIPDAVTRLRKLLMMSN GRLRLEH+RIARSEFGLPDDFEYSVVL+YPQFFRLFDAKETRNKYIEIVERD NLTVCAIEKARERVYREKGS
Subjt:  EQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGS

Query:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ
        DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE+LCLTVEKKI+LERIAHFRLAM+LPKKLKDFLLQ
Subjt:  DAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ

Query:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD
        HQGIFYISTRGNHGKLHT+FLREAYRR ELIEPNDVYLARR LAELVLLSPRKAKL+RELVGYRRERVGY+MESFR     D+ +D G G + NVRDV D
Subjt:  HQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSD

Query:  SDV----ESDFSEDDN
        SDV    ESDFS+D N
Subjt:  SDV----ESDFSEDDN

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic4.3e-3428.84Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAG-AFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIA
        ++R ++  +D+ ++ +KK + +L  + ++++Q ++ + +  L    R LG K+ +   A + K+P VFEI E     + +   +    L +++ +  +  
Subjt:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAG-AFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIA

Query:  QIPDA-VTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKA----RERVYREKGSDAED
        ++ D  V +LRKL+MMS   R+ LE +   +++ GLP +F  ++  RYPQ+FR+      R   +E+   D  L V A E +    R R   E+    + 
Subjt:  QIPDA-VTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKA----RERVYREKGSDAED

Query:  IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI
              V  P G  + K     + +++ + Y SPY+D S     ++E     EK A   IHELL LT EK+  ++ + HFR      ++L+  L++H  +
Subjt:  IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI

Query:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLL-------SPRKAKLDR--ELVGYRRERVGYEMESFRKDYED-DRFEDPGVGGKHN
        FY+S +G      +VFLREAYR SELI+ + + L + K+  LV +        PRK +  R  E+ G   +    E ES  +++ D D + +   GG  +
Subjt:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLL-------SPRKAKLDR--ELVGYRRERVGYEMESFRKDYED-DRFEDPGVGGKHN

Query:  VRDVSDSDVESD----FSEDDND
          D +D + E D    F +DD D
Subjt:  VRDVSDSDVESD----FSEDDND

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic7.1e-3729.52Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGF-KQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQQ
        ++R ++  +D  ++ +KK + +LK +++++ Q ++ + +  L    R LG  ++ +  A + +FP VF++ E  V  + + RLT  A       L++  +
Subjt:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGF-KQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQQ

Query:  KQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGSDAE
         + +      AV +LRKLLMMS + R+ +E V   + + GLP +F  +V LRYPQ+FR+   +  R   +E+   D  L V A E A E     +  +AE
Subjt:  KQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGSDAE

Query:  D--------IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLK
        +        ++F+  V  P G K+ +     + +++ +PY SPY D S   +RS   +K  EK A   +HE+L LTVEK+  ++ + HFR      + L+
Subjt:  D--------IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLK

Query:  DFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLS--PRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKH
          +++H  +FY+S +G+     +VFLREAY+ S+L+E N + L + K+  LV +   PR+A +     G   E +   ++S R    D+ ++D   G   
Subjt:  DFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLS--PRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKH

Query:  NVRDVSDSDVESDFSEDDND
         + D+ D   E    + D D
Subjt:  NVRDVSDSDVESDFSEDDND

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic1.4e-3730.22Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGF-KQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQQ
        ++R ++  +DN ++ +KK + +LK ++++++  ++ + +  L    R LG  ++ +  A + +FP VFE+ E  V  + + RLT  A       L ++ +
Subjt:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGF-KQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKA------HLQIEQQ

Query:  KQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIE------KARERVYRE
         + +      AVT+LRKLLMMS   R+ +E +   +++ GLP +F  ++ LRYPQ+FR+   +  R   +E+   D  L V A E      +ARE   R 
Subjt:  KQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIE------KARERVYRE

Query:  KGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDF
           D   ++F+  V  P G K+ +     V +++ +PY SPY D S   +RS  A+K  EK A   +HE+L LT+EK+  ++ + HFR      + L+  
Subjt:  KGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDF

Query:  LLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERV--GYEMESFRKDYEDDRFEDPGVGGKHN-
        L++H  +FY+S +G+     +VFLREAY+ S+L+E + + L + K+  LV + PR  +          +R     +M S   D EDD  ED G+    + 
Subjt:  LLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERV--GYEMESFRKDYEDDRFEDPGVGGKHN-

Query:  VRDVSDSDVESDFSEDD
        + ++S    ++D+   D
Subjt:  VRDVSDSDVESDFSEDD

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 15.6e-16779.18Show/hide
Query:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARR--LGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQ
        SQST+IPKK  RVRDHGYDNYMEVEKK RK++KF  LIL+Q N TI +S LD LARR  LGFKQH+ GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  Q
Subjt:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARR--LGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQ

Query:  IEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKG
        I  + +AV+ QIPDAVTRLRKL+MMSN GR+RLEHVRIAR+EFGLP+DFEYSV+L++PQFFRL D +ETR+KYIEIVE+D NL++CAIE+ RE  YR KG
Subjt:  IEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKG

Query:  SDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLL
         DAED+RFSF+VNFPPGFKIGKY+RIAVWKWQRLPYWSPYED+S YD+RS+EAQ R+EKR+VA IHELL LTVEKKITLERIAHFR  MNLPKKLK+FLL
Subjt:  SDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLL

Query:  QHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYR
        QHQGIFYISTRGN+GKLHTVFLRE Y+R EL+EPNDVYLARR+LAELVL+SPRKAK+D ELV YR
Subjt:  QHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYR

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial3.1e-2428.57Show/hide
Query:  RDHGYDNYMEV--EKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQIP
        RD  +DN   +    + + ++  ++ I+ + N+ IP+S +    R+      +   F+ KFP +FE +  P   + + RLT +A     Q++        
Subjt:  RDHGYDNYMEV--EKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQIP

Query:  DAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKE-TRNKYIEIVERDQNLTVC---AIEKARERVYREKGSDAEDIRFS
        D   RL+KL++MS    L L  V+  +   GLPDD+     +     FR  D ++  +   ++    D+ L+V    A++K R  V  E+          
Subjt:  DAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKE-TRNKYIEIVERDQNLTVC---AIEKARERVYREKGSDAEDIRFS

Query:  FIVNFPPGFKIGKYYRIAVWKW----QRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI
          + FP     G   R+ +  W    Q+LPY SPY+D S  D  S  A    EKR V  +HELLCL VE     +++   +    LP+K+     +H  I
Subjt:  FIVNFPPGFKIGKYYRIAVWKW----QRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI

Query:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERV
        FY+S +    K  T  LRE YR    +E + V   R+K  +L+  S    K  R   G+R E V
Subjt:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERV

Arabidopsis top hitse value%identityAlignment
AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein1.7e-5739.44Show/hide
Query:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQH---QAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHL
        S +TS      R RD  ++  M+  K   K++  QDL L       P   ++ L+ RL  K H    A +F+ K+PH+F +   PV+   +CRLT  A  
Subjt:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQH---QAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHL

Query:  QIEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLT--VCAIEKAR--ERV
           Q+  A+ A +   V RL +LL MS    + L  V     E GLPDDFE SV+ + P  F+L D  E+    +E+V+ ++       A+EK R  E  
Subjt:  QIEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLT--VCAIEKAR--ERV

Query:  YREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKL
          +   D  +I+FSF  ++PPG ++ K ++  V +WQRLPY  PYED+     +S      +EKRAVA  HE L LTVEK + +E+I+HFR    +   +
Subjt:  YREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKL

Query:  KDFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKA
        +D  L H G+FY+ST+   GK HTVFLREAY R  LI+PN VY ARRKL +LVLL    A
Subjt:  KDFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKA

AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein3.1e-3528.84Show/hide
Query:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAG-AFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIA
        ++R ++  +D+ ++ +KK + +L  + ++++Q ++ + +  L    R LG K+ +   A + K+P VFEI E     + +   +    L +++ +  +  
Subjt:  LQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAG-AFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIA

Query:  QIPDA-VTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKA----RERVYREKGSDAED
        ++ D  V +LRKL+MMS   R+ LE +   +++ GLP +F  ++  RYPQ+FR+      R   +E+   D  L V A E +    R R   E+    + 
Subjt:  QIPDA-VTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKA----RERVYREKGSDAED

Query:  IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI
              V  P G  + K     + +++ + Y SPY+D S     ++E     EK A   IHELL LT EK+  ++ + HFR      ++L+  L++H  +
Subjt:  IRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGI

Query:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLL-------SPRKAKLDR--ELVGYRRERVGYEMESFRKDYED-DRFEDPGVGGKHN
        FY+S +G      +VFLREAYR SELI+ + + L + K+  LV +        PRK +  R  E+ G   +    E ES  +++ D D + +   GG  +
Subjt:  FYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLL-------SPRKAKLDR--ELVGYRRERVGYEMESFRKDYED-DRFEDPGVGGKHN

Query:  VRDVSDSDVESD----FSEDDND
          D +D + E D    F +DD D
Subjt:  VRDVSDSDVESD----FSEDDND

AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein4.0e-16879.18Show/hide
Query:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARR--LGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQ
        SQST+IPKK  RVRDHGYDNYMEVEKK RK++KF  LIL+Q N TI +S LD LARR  LGFKQH+ GAF+LKFPHVFEIYEHPVQRILYCRLTRKA  Q
Subjt:  SQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARR--LGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQ

Query:  IEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKG
        I  + +AV+ QIPDAVTRLRKL+MMSN GR+RLEHVRIAR+EFGLP+DFEYSV+L++PQFFRL D +ETR+KYIEIVE+D NL++CAIE+ RE  YR KG
Subjt:  IEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKG

Query:  SDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLL
         DAED+RFSF+VNFPPGFKIGKY+RIAVWKWQRLPYWSPYED+S YD+RS+EAQ R+EKR+VA IHELL LTVEKKITLERIAHFR  MNLPKKLK+FLL
Subjt:  SDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLL

Query:  QHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYR
        QHQGIFYISTRGN+GKLHTVFLRE Y+R EL+EPNDVYLARR+LAELVL+SPRKAK+D ELV YR
Subjt:  QHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAKLDRELVGYR

AT5G45790.1 Ubiquitin carboxyl-terminal hydrolase family protein1.4e-5941.36Show/hide
Query:  GAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAK
        GAF+ K+PH FEI+ HP  + L C++T K  + I++++  V     DAV R++KLL++S  G LR+  +R+ R E GLP+DF  S++ +Y   FRL D +
Subjt:  GAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAK

Query:  ETRNKYIEIVER-DQNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATI
              +E+V+R D++L V  +E+ RE  YREK     +  ++F ++ P GFKI K +R  +  WQR+PY  P      YD + I    +R EKR VA I
Subjt:  ETRNKYIEIVER-DQNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATI

Query:  HELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAK--LDRELVG
        HELL LTVEK + +ER+AHFR  + +   +++ +L+H GIFY+ST+G+     T+FLREAY +  LIEPN +Y  RRK+ +LVLL  R ++  L RE   
Subjt:  HELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAK--LDRELVG

Query:  YRRERVGYEMESFRKDYEDDRFED
        +R E+    + S  +D+E  R  D
Subjt:  YRRERVGYEMESFRKDYEDDRFED

AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein2.5e-6138.68Show/hide
Query:  RVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLAR--RLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQ
        R RDH  D  +   +K   IL+   L+ ++  +  P   L +++R   L       GAF+ K+PH FEI+ HP  + L C++T K  + I++++  V   
Subjt:  RVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLAR--RLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQ

Query:  IPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVER-DQNLTVCAIEKARERVYREKGSDAEDIRFSF
          DAV R++KLL++S  G LR+  +R+ R E GLP+DF  S++ +Y   FRL D +      +E+V+R D++L V  +E+ RE  YREK     +  ++F
Subjt:  IPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVER-DQNLTVCAIEKARERVYREKGSDAEDIRFSF

Query:  IVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYIS
         ++ P GFKI K +R  +  WQR+PY  P      YD + I    +R EKR VA IHELL LTVEK + +ER+AHFR  + +   +++ +L+H GIFY+S
Subjt:  IVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSI-EAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYIS

Query:  TRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAK--LDRELVGYRRERVGYEMESFRKDYEDDRFED
        T+G+     T+FLREAY +  LIEPN +Y  RRK+ +LVLL  R ++  L RE   +R E+    + S  +D+E  R  D
Subjt:  TRGNHGKLHTVFLREAYRRSELIEPNDVYLARRKLAELVLLSPRKAK--LDRELVGYRRERVGYEMESFRKDYEDDRFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAATCCACCTCCATTCCCAAAAAGCTCCAAAGGGTCCGCGACCATGGCTACGATAACTACATGGAAGTGGAGAAGAAAACCCGGAAAATCCTCAAGTTTCAGGA
CCTTATTCTCACCCAAATTAACCAAACCATCCCAGTTTCTCGCCTCGATGTCTTAGCTCGTCGCCTCGGCTTCAAGCAGCACCAAGCCGGGGCTTTCGTCCTTAAATTCC
CTCACGTTTTTGAAATCTACGAGCACCCTGTTCAGCGAATCCTCTATTGCCGGTTAACCCGAAAAGCCCACCTCCAAATTGAGCAGCAAAAGCAGGCTGTGATTGCCCAG
ATTCCCGATGCTGTGACTCGCCTGAGGAAGCTCTTGATGATGTCCAACAAAGGCCGTCTTCGCCTCGAGCATGTTCGGATTGCCCGCTCCGAGTTCGGGCTGCCAGACGA
CTTCGAATACTCGGTAGTTCTCAGGTACCCTCAATTCTTTAGATTGTTTGATGCAAAAGAAACTAGGAATAAGTACATTGAAATTGTGGAAAGAGATCAAAACCTTACTG
TTTGTGCAATAGAGAAAGCTAGGGAGAGAGTTTACAGAGAAAAAGGAAGTGATGCTGAAGATATTAGGTTCTCTTTCATTGTGAATTTTCCTCCTGGGTTCAAGATTGGG
AAGTACTACAGAATTGCAGTGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATACGAGGACGTTTCCGAGTACGATATGAGGTCGATAGAAGCCCAGAAGAGGATGGA
GAAGAGGGCAGTGGCCACAATTCATGAGCTCTTGTGTCTGACTGTGGAGAAGAAGATCACTTTGGAACGGATTGCACATTTTCGACTAGCGATGAATCTGCCGAAGAAGT
TGAAGGATTTTCTTCTTCAGCACCAGGGGATTTTCTACATTTCAACCAGAGGGAACCATGGGAAGCTTCACACTGTTTTCCTCAGGGAGGCTTATAGGAGGAGTGAGTTA
ATAGAGCCAAATGATGTGTATTTAGCAAGAAGGAAATTGGCTGAGTTGGTTCTACTCAGCCCAAGAAAGGCAAAACTAGACAGAGAATTGGTTGGGTATAGGAGAGAGAG
AGTGGGTTATGAAATGGAAAGCTTTAGGAAAGATTATGAGGATGATAGATTTGAAGATCCTGGTGTTGGGGGCAAACACAATGTGAGAGATGTTTCGGACTCTGATGTTG
AATCTGATTTTTCAGAGGACGATAACGAT
mRNA sequenceShow/hide mRNA sequence
ATGAGCCAATCCACCTCCATTCCCAAAAAGCTCCAAAGGGTCCGCGACCATGGCTACGATAACTACATGGAAGTGGAGAAGAAAACCCGGAAAATCCTCAAGTTTCAGGA
CCTTATTCTCACCCAAATTAACCAAACCATCCCAGTTTCTCGCCTCGATGTCTTAGCTCGTCGCCTCGGCTTCAAGCAGCACCAAGCCGGGGCTTTCGTCCTTAAATTCC
CTCACGTTTTTGAAATCTACGAGCACCCTGTTCAGCGAATCCTCTATTGCCGGTTAACCCGAAAAGCCCACCTCCAAATTGAGCAGCAAAAGCAGGCTGTGATTGCCCAG
ATTCCCGATGCTGTGACTCGCCTGAGGAAGCTCTTGATGATGTCCAACAAAGGCCGTCTTCGCCTCGAGCATGTTCGGATTGCCCGCTCCGAGTTCGGGCTGCCAGACGA
CTTCGAATACTCGGTAGTTCTCAGGTACCCTCAATTCTTTAGATTGTTTGATGCAAAAGAAACTAGGAATAAGTACATTGAAATTGTGGAAAGAGATCAAAACCTTACTG
TTTGTGCAATAGAGAAAGCTAGGGAGAGAGTTTACAGAGAAAAAGGAAGTGATGCTGAAGATATTAGGTTCTCTTTCATTGTGAATTTTCCTCCTGGGTTCAAGATTGGG
AAGTACTACAGAATTGCAGTGTGGAAATGGCAGCGGCTTCCTTATTGGTCGCCATACGAGGACGTTTCCGAGTACGATATGAGGTCGATAGAAGCCCAGAAGAGGATGGA
GAAGAGGGCAGTGGCCACAATTCATGAGCTCTTGTGTCTGACTGTGGAGAAGAAGATCACTTTGGAACGGATTGCACATTTTCGACTAGCGATGAATCTGCCGAAGAAGT
TGAAGGATTTTCTTCTTCAGCACCAGGGGATTTTCTACATTTCAACCAGAGGGAACCATGGGAAGCTTCACACTGTTTTCCTCAGGGAGGCTTATAGGAGGAGTGAGTTA
ATAGAGCCAAATGATGTGTATTTAGCAAGAAGGAAATTGGCTGAGTTGGTTCTACTCAGCCCAAGAAAGGCAAAACTAGACAGAGAATTGGTTGGGTATAGGAGAGAGAG
AGTGGGTTATGAAATGGAAAGCTTTAGGAAAGATTATGAGGATGATAGATTTGAAGATCCTGGTGTTGGGGGCAAACACAATGTGAGAGATGTTTCGGACTCTGATGTTG
AATCTGATTTTTCAGAGGACGATAACGAT
Protein sequenceShow/hide protein sequence
MSQSTSIPKKLQRVRDHGYDNYMEVEKKTRKILKFQDLILTQINQTIPVSRLDVLARRLGFKQHQAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKQAVIAQ
IPDAVTRLRKLLMMSNKGRLRLEHVRIARSEFGLPDDFEYSVVLRYPQFFRLFDAKETRNKYIEIVERDQNLTVCAIEKARERVYREKGSDAEDIRFSFIVNFPPGFKIG
KYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHELLCLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREAYRRSEL
IEPNDVYLARRKLAELVLLSPRKAKLDRELVGYRRERVGYEMESFRKDYEDDRFEDPGVGGKHNVRDVSDSDVESDFSEDDND