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MS016649 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016649
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold587:443917..444150
RNA-Seq ExpressionMS016649
SyntenyMS016649
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN82685.1 hypothetical protein VITISV_000485 [Vitis vinifera]9.3e-0436.92Show/hide
Query:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWR
        K LW     T  W  W ERNNRIF DKG+S + + + + + +  W   S  F    L+ L   WR
Subjt:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWR
RVX02903.1 Actin-related protein 7 [Vitis vinifera]7.1e-0436.36Show/hide
Query:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRC
        K LW     T  W  W ERNNRIF DKG+S + + + + + +  W   S  F    L+ L   W C
Subjt:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRC
XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]7.1e-0435.21Show/hide
Query:  REKKLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRCFL
        +  +LLW N ++      W ERN RIF +K  S  + +E     A +WC  S  F AY+LS     W  F+
Subjt:  REKKLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRCFL
TrEMBL top hitse value%identityAlignment
A0A438J1R4 Actin-related protein 73.5e-0436.36Show/hide
Query:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRC
        K LW     T  W  W ERNNRIF DKG+S + + + + + +  W   S  F    L+ L   W C
Subjt:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRC
A5AIV6 zf-RVT domain-containing protein5.9e-0437.5Show/hide
Query:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATW
        K LW     TF W  W ERNNRIF DKG+S + + + + + +  W   S  F    L+ L   W
Subjt:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATW
A5AY60 Reverse transcriptase domain-containing protein4.5e-0436.92Show/hide
Query:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWR
        K LW     T  W  W ERNNRIF DKG+S + + + + + +  W   S  F    L+ L   WR
Subjt:  KLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTAACCGGGGATCCGTTCAAAAGAGAGAAGAAGCTCCTATGGGTCAACTTCATTAGAACATTCTCGTGGTCTACTTGGATGGAGAGAAACAATCGCATTTTCAATGACAA
AGGGAAGTCTATGGACAACATTATGGAACCTTTAACTTATTTGGCTCTCAATTGGTGCAAAAATTCTACATACTTCCATGCCTATAATTTATCTTCTTTAATGGCCACTT
GGAGGTGTTTCTTG
mRNA sequenceShow/hide mRNA sequence
CTAACCGGGGATCCGTTCAAAAGAGAGAAGAAGCTCCTATGGGTCAACTTCATTAGAACATTCTCGTGGTCTACTTGGATGGAGAGAAACAATCGCATTTTCAATGACAA
AGGGAAGTCTATGGACAACATTATGGAACCTTTAACTTATTTGGCTCTCAATTGGTGCAAAAATTCTACATACTTCCATGCCTATAATTTATCTTCTTTAATGGCCACTT
GGAGGTGTTTCTTG
Protein sequenceShow/hide protein sequence
LTGDPFKREKKLLWVNFIRTFSWSTWMERNNRIFNDKGKSMDNIMEPLTYLALNWCKNSTYFHAYNLSSLMATWRCFL