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MS016651 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016651
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein L2
Genome locationscaffold587:495099..495250
RNA-Seq ExpressionMS016651
SyntenyMS016651
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QCD14124.1 ribosomal protein L2 [Actinidia eriantha]6.0e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

QDA22811.1 ribosomal protein L2 [Monotropa hypopitys]6.0e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

QEM01971.1 ribosomal protein L2 [Camellia sinensis var. assamica]6.0e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

YP_009243674.1 ribosomal protein L2 [Cannabis sativa]3.5e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

YP_009412591.1 ribosomal protein L2 [Hibiscus cannabinus]4.6e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQERRALRQF L TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

TrEMBL top hitse value%identityAlignment
A0A0M3ULW5 Ribosomal protein L21.7e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

A0A220T1H8 Ribosomal protein L22.2e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQERRALRQF L TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

A0A5C7GPL0 Ribosomal_L2 domain-containing protein2.9e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

A0A7L8ZUH8 Ribosomal protein L22.9e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

B6VJV4 Ribosomal protein L22.9e-1286.27Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQSQE RALRQFTL TGKSAGRNSSGRITVF++G GSKRLQRRID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial1.6e-1278.43Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQS + RALR FTL TGKSAGRNSSGRITVF++G GSKRLQR+ID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

P26859 60S ribosomal protein L2, mitochondrial7.1e-0868.89Show/hide
Query:  RALRQFT--LTGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        +AL+Q T  L   SAGRNSSGRITVF++G GSKRLQR+ID KR+T
Subjt:  RALRQFT--LTGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

P92812 60S ribosomal protein L2, mitochondrial1.6e-1278.43Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQS + RALR FTL TGKSAGRNSSGRITVF++G GSKRLQR+ID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

P93311 60S ribosomal protein L2, mitochondrial2.4e-1184.09Show/hide
Query:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        RALRQFTL TGKSAGRNSSGRITVF++G GSKRL RRID+KR+T
Subjt:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

Q2F969 60S ribosomal protein L2, mitochondrial1.6e-1278.43Show/hide
Query:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        MRQS + RALR FTL TGKSAGRNSSGRITVF++G GSKRLQR+ID+KR+T
Subjt:  MRQSQERRALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.7e-1284.09Show/hide
Query:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        RALRQFTL TGKSAGRNSSGRITVF++G GSKRL RRID+KR+T
Subjt:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein1.7e-1284.09Show/hide
Query:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT
        RALRQFTL TGKSAGRNSSGRITVF++G GSKRL RRID+KR+T
Subjt:  RALRQFTL-TGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAAAGCCAAGAGAGGAGAGCACTTAGACAATTCACTTTGACAGGGAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTTACCAAGGGAGTGGATC
GAAGCGATTGCAGCGAAGAATTGATATGAAACGAAACACA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAAAGCCAAGAGAGGAGAGCACTTAGACAATTCACTTTGACAGGGAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGTTTTTTACCAAGGGAGTGGATC
GAAGCGATTGCAGCGAAGAATTGATATGAAACGAAACACA
Protein sequenceShow/hide protein sequence
MRQSQERRALRQFTLTGKSAGRNSSGRITVFYQGSGSKRLQRRIDMKRNT