; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016654 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016654
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold587:513464..513820
RNA-Seq ExpressionMS016654
SyntenyMS016654
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032570.1 protein SAND [Cucumis melo var. makuwa]1.5e-2444.92Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+  L  +N A LAKW WRF  EPS+LW ++V S++    F W +  K++   R PWI+ISR  +KVE  ++FK+G G RILFW   W+N   L  +FP
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
         L+R++  P GS+  +WD
Subjt:  NLFRVSSSPNGSIAEFWD

KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]1.9e-2443.97Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GG+   N+A LAKWGWR+ +E SALW Q++ S++G   F WF+K K     R PW+NI+R W+ V+  + F LG+G RI F    W+ ++P+K++F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEF
         LFR++  P  S   F
Subjt:  NLFRVSSSPNGSIAEF

KAA0056660.1 GTP-binding protein [Cucumis melo var. makuwa]1.5e-2450.94Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GGL  KN A LAKWGW F +E SALW Q+++S++G   F W +  K     R  WINIS   KKVE  + FK+G+GAR+ FW  SW+   PLK +FP
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVS
        +LFR++
Subjt:  NLFRVS

TYK06564.1 hypothetical protein E5676_scaffold453G00250 [Cucumis melo var. makuwa]7.3e-2445.76Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+ GLS+KN+  LAKWGW F +E  +LW Q+V S+YG  +  W +  K     + PWI IS   +K+E  + FKLG+G RI FW   W+ ++  +  F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
         LFRVS  PNGS+A  WD
Subjt:  NLFRVSSSPNGSIAEFWD

TYK14440.1 uncharacterized protein E5676_scaffold186G00990 [Cucumis melo var. makuwa]4.5e-2645.76Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GG+ +K+ A LAKWGWR+ +E +ALW Q++ S++G   F W ++ K     R PW++ISR W+KVE  + FKLG G R+ FW  SW  + PL+ +F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
          FR+S  P  S+A  WD
Subjt:  NLFRVSSSPNGSIAEFWD

TrEMBL top hitse value%identityAlignment
A0A5A7SP09 Vacuolar fusion protein MON1 homolog7.1e-2544.92Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+  L  +N A LAKW WRF  EPS+LW ++V S++    F W +  K++   R PWI+ISR  +KVE  ++FK+G G RILFW   W+N   L  +FP
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
         L+R++  P GS+  +WD
Subjt:  NLFRVSSSPNGSIAEFWD

A0A5A7T2Y0 zf-RVT domain-containing protein9.3e-2543.97Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GG+   N+A LAKWGWR+ +E SALW Q++ S++G   F WF+K K     R PW+NI+R W+ V+  + F LG+G RI F    W+ ++P+K++F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEF
         LFR++  P  S   F
Subjt:  NLFRVSSSPNGSIAEF

A0A5A7UNL3 GTP-binding protein7.1e-2550.94Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GGL  KN A LAKWGW F +E SALW Q+++S++G   F W +  K     R  WINIS   KKVE  + FK+G+GAR+ FW  SW+   PLK +FP
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVS
        +LFR++
Subjt:  NLFRVS

A0A5D3C5F2 Uncharacterized protein3.5e-2445.76Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+ GLS+KN+  LAKWGW F +E  +LW Q+V S+YG  +  W +  K     + PWI IS   +K+E  + FKLG+G RI FW   W+ ++  +  F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
         LFRVS  PNGS+A  WD
Subjt:  NLFRVSSSPNGSIAEFWD

A0A5D3CSP2 Uncharacterized protein2.2e-2645.76Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP
        LG+GG+ +K+ A LAKWGWR+ +E +ALW Q++ S++G   F W ++ K     R PW++ISR W+KVE  + FKLG G R+ FW  SW  + PL+ +F 
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFP

Query:  NLFRVSSSPNGSIAEFWD
          FR+S  P  S+A  WD
Subjt:  NLFRVSSSPNGSIAEFWD

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657508.7e-0427.08Show/hide
Query:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKL-GSGARILFWHHSWINDSPL
        LGV      N A ++K GWR  QE ++LW  +++  Y +            G     W +I+   + V    +  + G G +I FW   W++  PL
Subjt:  LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKL-GSGARILFWHHSWINDSPL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGGAGTTGGTGGGCTTTCTGATAAGAACAGTGCCCACCTTGCCAAATGGGGGTGGCGTTTTGGGCAAGAGCCCTCAGCATTATGGCATCAAATGGTGGAAAGTCTCTA
TGGTTTAAGCAATTTCGGTTGGTTTTCAAAGGAGAAACAGAACGGGTGCGCACGGTGCCCATGGATCAACATCTCCCGTCATTGGAAGAAGGTAGAGCATTTCTCCATCT
TTAAATTGGGTTCCGGAGCTCGAATTCTATTTTGGCATCACAGCTGGATTAATGATTCTCCTCTTAAGGATAGATTTCCAAATCTATTCCGTGTTTCTTCATCACCCAAT
GGATCAATTGCTGAGTTTTGGGACCCT
mRNA sequenceShow/hide mRNA sequence
CTTGGAGTTGGTGGGCTTTCTGATAAGAACAGTGCCCACCTTGCCAAATGGGGGTGGCGTTTTGGGCAAGAGCCCTCAGCATTATGGCATCAAATGGTGGAAAGTCTCTA
TGGTTTAAGCAATTTCGGTTGGTTTTCAAAGGAGAAACAGAACGGGTGCGCACGGTGCCCATGGATCAACATCTCCCGTCATTGGAAGAAGGTAGAGCATTTCTCCATCT
TTAAATTGGGTTCCGGAGCTCGAATTCTATTTTGGCATCACAGCTGGATTAATGATTCTCCTCTTAAGGATAGATTTCCAAATCTATTCCGTGTTTCTTCATCACCCAAT
GGATCAATTGCTGAGTTTTGGGACCCT
Protein sequenceShow/hide protein sequence
LGVGGLSDKNSAHLAKWGWRFGQEPSALWHQMVESLYGLSNFGWFSKEKQNGCARCPWINISRHWKKVEHFSIFKLGSGARILFWHHSWINDSPLKDRFPNLFRVSSSPN
GSIAEFWDP