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MS016684 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016684
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationscaffold563:97554..97910
RNA-Seq ExpressionMS016684
SyntenyMS016684
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137753.1 uncharacterized protein LOC101220657 isoform X1 [Cucumis sativus]3.5e-1867.06Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E NSK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQDVY     TQNPATG NS +K+D    +DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

XP_016899678.1 PREDICTED: uncharacterized protein LOC103486348 isoform X3 [Cucumis melo]3.5e-1865.88Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E +SK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQD+Y      QNP TG NSS+K+DG E  DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

XP_022145691.1 uncharacterized protein LOC111015084 [Momordica charantia]9.2e-4398.91Show/hide
Query:  WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKG+
Subjt:  WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

XP_038905456.1 uncharacterized protein LOC120091479 isoform X1 [Benincasa hispida]2.1e-1864.77Show/hide
Query:  VSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        +  E  S+ KE K+Q+TSSRE  SF QEQ   PCHLSSSIYYGG+DVY     TQNP TG NSS+K+DG E  DDSGGASRGNWW+G+
Subjt:  VSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

XP_038905457.1 uncharacterized protein LOC120091479 isoform X2 [Benincasa hispida]2.7e-1865.52Show/hide
Query:  VSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKG
        +  E  S+ KE K+Q+TSSRE  SF QEQ   PCHLSSSIYYGG+DVY     TQNP TG NSS+K+DG E  DDSGGASRGNWW+G
Subjt:  VSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKG

TrEMBL top hitse value%identityAlignment
A0A0A0LD07 Uncharacterized protein1.7e-1867.06Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E NSK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQDVY     TQNPATG NS +K+D    +DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

A0A1S3B5B7 uncharacterized protein LOC103486348 isoform X11.7e-1865.88Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E +SK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQD+Y      QNP TG NSS+K+DG E  DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

A0A1S4DUN5 uncharacterized protein LOC103486348 isoform X31.7e-1865.88Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E +SK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQD+Y      QNP TG NSS+K+DG E  DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

A0A5D3DN19 Uncharacterized protein1.7e-1865.88Show/hide
Query:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E +SK KE K+ +TSSRE  SF QEQ  +PCHLSSSIYYGGQD+Y      QNP TG NSS+K+DG E  DDSGGASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

A0A6J1CX28 uncharacterized protein LOC1110150844.5e-4398.91Show/hide
Query:  WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKG+
Subjt:  WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein6.4e-1044.05Show/hide
Query:  SNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        +N ++   + + + ++E  S+  E+   PC+LSSSIYYGGQD Y    +T NP      + KKDGEE D +S  ASRGNWW+G+
Subjt:  SNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

AT3G55646.1 unknown protein3.8e-1043.21Show/hide
Query:  KSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        +S   K + ++ +E  S+  E+   PCHLSSS+YYGGQ+ Y       +  T  + + KKDGEE   DS  ASRGNWW+G+
Subjt:  KSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.4e-1250.57Show/hide
Query:  ESNSKSKETKSQNTSSRE--ASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT
        E  SK+     +N   +E   S + Q+Q   PCHLSSSIYYGG DVY  P N+ +     NS+ KKDG E  DDSG ASRGNWW+G+
Subjt:  ESNSKSKETKSQNTSSRE--ASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).8.1e-0544.83Show/hide
Query:  ESNSKSKETKSQNTSSRE--ASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPAT
        E  SK+     +N   +E   S + Q+Q   PCHLSSSIYYGG DVY  P N+ + +T
Subjt:  ESNSKSKETKSQNTSSRE--ASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPAT

AT5G59080.1 unknown protein4.3e-0636.96Show/hide
Query:  PVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSG--GASRGNWWKGT
        P  S  S      +K  + + R  S   QE    PCHLSSS+YYGGQDVY     T      + +  ++ GE+D +       SRGNWW+G+
Subjt:  PVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSG--GASRGNWWKGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGAGCCTGTTGTCTCTGCAGAATCAAACTCCAAGAGTAAGGAAACGAAGAGCCAGAACACATCAAGCAGAGAAGCGAGTTCGTTTAATCAGGAACAAATTGCACACCC
ATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTGTATCCCCACCCCCACAATACCCAAAACCCTGCAACTGGATTGAACTCTTCCATTAAGAAAGATGGGG
AAGAAGATGATGATGATTCGGGTGGTGCTTCCAGAGGAAACTGGTGGAAAGGTACG
mRNA sequenceShow/hide mRNA sequence
TGGGAGCCTGTTGTCTCTGCAGAATCAAACTCCAAGAGTAAGGAAACGAAGAGCCAGAACACATCAAGCAGAGAAGCGAGTTCGTTTAATCAGGAACAAATTGCACACCC
ATGTCATCTTAGTTCTTCAATCTACTATGGTGGTCAGGATGTGTATCCCCACCCCCACAATACCCAAAACCCTGCAACTGGATTGAACTCTTCCATTAAGAAAGATGGGG
AAGAAGATGATGATGATTCGGGTGGTGCTTCCAGAGGAAACTGGTGGAAAGGTACG
Protein sequenceShow/hide protein sequence
WEPVVSAESNSKSKETKSQNTSSREASSFNQEQIAHPCHLSSSIYYGGQDVYPHPHNTQNPATGLNSSIKKDGEEDDDDSGGASRGNWWKGT