; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS016688 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016688
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCopper transporter
Genome locationscaffold563:114483..114920
RNA-Seq ExpressionMS016688
SyntenyMS016688
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596378.1 Copper transporter 4, partial [Cucurbita argyrosperma subsp. sororia]8.5e-5981.88Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWPG +SAMYALAVIFVFVLAV VEWLTY NFMK+SA++V T VLQTAIH 
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL+YMV+LSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK+ESDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

KAG7027927.1 Copper transporter 4, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-5981.88Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWPG +SAMYALAVIFVFVLAV VEWLTY NFMK+SA++V T VLQTAIH 
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL+YMV+LSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK+ESDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

XP_022145715.1 copper transporter 4 [Momordica charantia]3.0e-7299.32Show/hide
Query:  MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRT
        MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVS AVLQTAIHAVRT
Subjt:  MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRT

Query:  GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
Subjt:  GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

XP_022971334.1 copper transporter 6-like [Cucurbita maxima]2.5e-5881.88Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWPG +SAMYALAVIFVFVLAV VEWLTY NFMKQSA++V T VLQ+AIHA
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL YMVMLSVMSFNGGIFLAAVGGHAVGFVLFR RA+RK+ESDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

XP_023540707.1 copper transporter 4-like [Cucurbita pepo subsp. pepo]3.8e-5982.55Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWPG +SAMYALAVIFVFVLAV VEWLTY NFMKQSA++V T VLQTAIHA
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL+YMV+LSVMSFNGGIFLAAVGGHAVGFVLFRAR KRK+ESDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

TrEMBL top hitse value%identityAlignment
A0A0A0LD01 Copper transporter4.4e-5380Show/hide
Query:  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSY
        +K TS HNLG VPPP+ ETN A K VVHKSLYW HDAQVLFTGWPG +S MYALAVIFVFVLAV+VEWL  CNFMKQ+ ESV   V+QTAIHAVRTGLSY
Subjt:  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSY

Query:  MVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK
        MVML+VMSFNGGIFLAAVGGHAVGFVLF+ R +RK
Subjt:  MVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK

A0A5A7TLC7 Copper transporter1.9e-5179.26Show/hide
Query:  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSY
        +K TS HNLG VPPP+ ETN A KT  HKSLYW HDAQVLFTGWPG +S MYALAVIFVFVLAV+VEWL  CNFMKQ+ ESV   V QTAIHAVRTGLSY
Subjt:  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSY

Query:  MVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK
        MVML+VMSFNGGIFLAAVGGHAVGFVLF+ R +RK
Subjt:  MVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK

A0A6J1CV92 Copper transporter1.5e-7299.32Show/hide
Query:  MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRT
        MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVS AVLQTAIHAVRT
Subjt:  MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRT

Query:  GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
Subjt:  GLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

A0A6J1FMA0 Copper transporter2.0e-5881.21Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWP  +SAMYALAVIFVFVLAV VEWLTY NFMK+SA++V T VLQTAIHA
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL+YMV+LSVMSFNGGIFLAAVGGHAVGFVLFRARAKRK++SDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

A0A6J1I894 Copper transporter1.2e-5881.88Show/hide
Query:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA
        + LK TS HNLG VPPPA E     TNNAGKTVVHK+LYW HDAQVLFTGWPG +SAMYALAVIFVFVLAV VEWLTY NFMKQSA++V T VLQ+AIHA
Subjt:  LKLKATSRHNLGTVPPPATE-----TNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHA

Query:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK
        VRTGL YMVMLSVMSFNGGIFLAAVGGHAVGFVLFR RA+RK+ESDS K
Subjt:  VRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 14.4e-2647.06Show/hide
Query:  KTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQS---AESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG
        K ++H + +W  + +VLF+GWPG  S MYAL +IFVF LAVL EWL + + ++ S   + + +  ++QTA++ +R GL+Y+VML+VMSFN G+FL A+ G
Subjt:  KTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQS---AESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG

Query:  HAVGFVLFRARAKRKSESD
        HAVGF+LF ++  R +  D
Subjt:  HAVGFVLFRARAKRKSESD

Q60EN8 Copper transporter 21.6e-2347.54Show/hide
Query:  VPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAE---SVSTAVLQTAIHAVRTGLSYMVMLSVMS
        +PPP      A    +H + +W  + +VLFT WPGA   MYALA++F+F LAVL+E+  Y     + A      + A L+TA+HAVR G++Y++ML++MS
Subjt:  VPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAE---SVSTAVLQTAIHAVRTGLSYMVMLSVMS

Query:  FNGGIFLAAVGGHAVGFVLFRA
        FNGG+FLA V GHA GF+ FRA
Subjt:  FNGGIFLAAVGGHAVGFVLFRA

Q8GWP3 Copper transporter 63.8e-2541.48Show/hide
Query:  GTVPP--PATETN--NAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMK-QSAESVSTAVLQTAIHAVRTGLSYMVML
        G +PP  P++  N  N+   ++H + +W  + ++LF+GWPG    MY L +I VF+LAV+VEWL + + ++ + + S +  ++QTA++ ++TGL+Y+VML
Subjt:  GTVPP--PATETN--NAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMK-QSAESVSTAVLQTAIHAVRTGLSYMVML

Query:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD
        +VMSFNGG+F+ A+ G AVGF+LF + A +    D
Subjt:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD

Q8SAA5 Copper transporter 43.6e-2850.86Show/hide
Query:  TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYC---NFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGH
        +++H + YW ++ QVLF+GWPG+D  MYALA+IFVF LA L EWL  C   + +KQ A+ ++    +TA++ V++G SY+V+L+V+SFNGG+FLAA+ GH
Subjt:  TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYC---NFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGH

Query:  AVGFVLFRARAKRKSE
        A+GF +FR RA R  +
Subjt:  AVGFVLFRARAKRKSE

Q9STG2 Copper transporter 24.2e-2440.74Show/hide
Query:  VPPPATETNNAGK------TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVL-QTAIHAVRTGLSYMVML
        +PPP+  +++          ++H + +W  + +VLF+GWPG  S MYAL +I +F+LAV+ EWL +   ++ S  +   A L QTA++ ++TGLSY+VML
Subjt:  VPPPATETNNAGK------TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVL-QTAIHAVRTGLSYMVML

Query:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD
        +VMSFN G+F+ A+ G+ VGF LF +   +K   D
Subjt:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family2.7e-2641.48Show/hide
Query:  GTVPP--PATETN--NAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMK-QSAESVSTAVLQTAIHAVRTGLSYMVML
        G +PP  P++  N  N+   ++H + +W  + ++LF+GWPG    MY L +I VF+LAV+VEWL + + ++ + + S +  ++QTA++ ++TGL+Y+VML
Subjt:  GTVPP--PATETN--NAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMK-QSAESVSTAVLQTAIHAVRTGLSYMVML

Query:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD
        +VMSFNGG+F+ A+ G AVGF+LF + A +    D
Subjt:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD

AT2G37925.1 copper transporter 42.6e-2950.86Show/hide
Query:  TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYC---NFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGH
        +++H + YW ++ QVLF+GWPG+D  MYALA+IFVF LA L EWL  C   + +KQ A+ ++    +TA++ V++G SY+V+L+V+SFNGG+FLAA+ GH
Subjt:  TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYC---NFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGH

Query:  AVGFVLFRARAKRKSE
        A+GF +FR RA R  +
Subjt:  AVGFVLFRARAKRKSE

AT3G46900.1 copper transporter 23.0e-2540.74Show/hide
Query:  VPPPATETNNAGK------TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVL-QTAIHAVRTGLSYMVML
        +PPP+  +++          ++H + +W  + +VLF+GWPG  S MYAL +I +F+LAV+ EWL +   ++ S  +   A L QTA++ ++TGLSY+VML
Subjt:  VPPPATETNNAGK------TVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVL-QTAIHAVRTGLSYMVML

Query:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD
        +VMSFN G+F+ A+ G+ VGF LF +   +K   D
Subjt:  SVMSFNGGIFLAAVGGHAVGFVLFRARAKRKSESD

AT5G59030.1 copper transporter 13.2e-2747.06Show/hide
Query:  KTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQS---AESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG
        K ++H + +W  + +VLF+GWPG  S MYAL +IFVF LAVL EWL + + ++ S   + + +  ++QTA++ +R GL+Y+VML+VMSFN G+FL A+ G
Subjt:  KTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQS---AESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG

Query:  HAVGFVLFRARAKRKSESD
        HAVGF+LF ++  R +  D
Subjt:  HAVGFVLFRARAKRKSESD

AT5G59040.1 copper transporter 34.3e-2444.35Show/hide
Query:  VVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGF
        ++H + +W    +VLF GWPG    MY + +  +FV++   E L+ C FMK    S+   +LQTA++ VR  LSY+VML+VMSFNGG+F+AA+ G  +GF
Subjt:  VVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGF

Query:  VLFRARAKRKSESDS
        ++F +RA R + S+S
Subjt:  VLFRARAKRKSESDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTGAAACTGAAAGCGACGTCTCGTCATAACCTCGGCACCGTCCCGCCGCCGGCGACGGAAACGAACAATGCCGGGAAGACGGTGGTGCATAAGTCTCTGTACTG
GAGCCACGACGCCCAAGTCCTGTTCACCGGGTGGCCCGGTGCGGACTCGGCCATGTACGCACTGGCGGTGATTTTCGTCTTCGTTCTGGCCGTCCTCGTCGAATGGCTCA
CTTACTGCAACTTCATGAAGCAGAGCGCCGAGAGTGTCTCGACGGCGGTGCTGCAGACGGCGATACACGCGGTGCGCACGGGGTTGAGTTACATGGTGATGCTATCCGTC
ATGTCGTTCAACGGCGGGATCTTCCTGGCCGCGGTCGGTGGCCACGCTGTGGGCTTCGTTCTGTTCAGAGCCCGTGCCAAAAGAAAGAGCGAATCAGATTCCACCAAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTGAAACTGAAAGCGACGTCTCGTCATAACCTCGGCACCGTCCCGCCGCCGGCGACGGAAACGAACAATGCCGGGAAGACGGTGGTGCATAAGTCTCTGTACTG
GAGCCACGACGCCCAAGTCCTGTTCACCGGGTGGCCCGGTGCGGACTCGGCCATGTACGCACTGGCGGTGATTTTCGTCTTCGTTCTGGCCGTCCTCGTCGAATGGCTCA
CTTACTGCAACTTCATGAAGCAGAGCGCCGAGAGTGTCTCGACGGCGGTGCTGCAGACGGCGATACACGCGGTGCGCACGGGGTTGAGTTACATGGTGATGCTATCCGTC
ATGTCGTTCAACGGCGGGATCTTCCTGGCCGCGGTCGGTGGCCACGCTGTGGGCTTCGTTCTGTTCAGAGCCCGTGCCAAAAGAAAGAGCGAATCAGATTCCACCAAA
Protein sequenceShow/hide protein sequence
MTLKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVFVLAVLVEWLTYCNFMKQSAESVSTAVLQTAIHAVRTGLSYMVMLSV
MSFNGGIFLAAVGGHAVGFVLFRARAKRKSESDSTK