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MS016746 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS016746
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUvrABC system C protein
Genome locationscaffold563:590980..592990
RNA-Seq ExpressionMS016746
SyntenyMS016746
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137707.1 uncharacterized protein LOC101209674 [Cucumis sativus]5.4e-2289.39Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RV SYLVNE+LV+SLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKD SKNF+
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
XP_022145531.1 uncharacterized protein LOC111014959 [Momordica charantia]5.2e-25100Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]1.8e-2290.91Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSR+FQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNF+
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
XP_022949523.1 uncharacterized protein LOC111452848 [Cucurbita moschata]4.1e-2290.91Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSRSFQRFAVRTSKQIEDIS KAAQKKQELAEQ+KDLSKNFE
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]5.4e-2289.39Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSR+FQRFAVRTSKQIEDISNKAA+KKQELAEQVKDLSKNF+
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
TrEMBL top hitse value%identityAlignment
A0A6J1CWK8 uncharacterized protein LOC1110149592.5e-25100Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
A0A6J1F5E7 uncharacterized protein LOC1114424708.9e-2390.91Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSR+FQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNF+
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
A0A6J1GCB5 uncharacterized protein LOC1114528482.0e-2290.91Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSRSFQRFAVRTSKQIEDIS KAAQKKQELAEQ+KDLSKNFE
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
A0A6J1I5H8 uncharacterized protein LOC1114701022.0e-2290.91Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSRSFQRFAVRTSKQIEDIS KAAQKKQELAEQ+KDLSKNFE
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
A0A6J1IZW4 uncharacterized protein LOC1114821822.6e-2289.39Show/hide
Query:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        MAGGNF++RVVSYLVNE+LV+SLANSR+FQRFAVRTSKQIEDISNKAA+KKQELAEQVKDLSKNF+
Subjt:  MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein6.8e-1554.69Show/hide
Query:  GGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE
        GGNFI RV+SY+ NE +V+ LANS +FQRFAVRTSK+IE++S  AA+ ++++A+Q+++ +KN +
Subjt:  GGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATAAACAGAGTAGTTTCTTATCTCGTGAATGAACTGCTCGTCGATAGTCTTGCGAACAGCCGTTCGTTTCAAAGGTTTGCGGTGAGGACATC
AAAACAAATCGAGGATATATCTAACAAGGCTGCACAGAAGAAGCAAGAACTTGCGGAACAGGTGAAAGATCTGTCTAAAAATTTCGAGGTGAGCTGCTTCTTACAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGTGGAAATTTCATAAACAGAGTAGTTTCTTATCTCGTGAATGAACTGCTCGTCGATAGTCTTGCGAACAGCCGTTCGTTTCAAAGGTTTGCGGTGAGGACATC
AAAACAAATCGAGGATATATCTAACAAGGCTGCACAGAAGAAGCAAGAACTTGCGGAACAGGTGAAAGATCTGTCTAAAAATTTCGAGGTGAGCTGCTTCTTACAT
Protein sequenceShow/hide protein sequence
MAGGNFINRVVSYLVNELLVDSLANSRSFQRFAVRTSKQIEDISNKAAQKKQELAEQVKDLSKNFEVSCFLH